CAZyme Information

Basic Information
SpeciesRicinus communis
Cazyme ID27698.m000067
FamilyGT4
Protein PropertiesLength: 377 Molecular Weight: 42024.5 Isoelectric Point: 9.11
ChromosomeChromosome/Scaffold: 27698 Start: 4791 End: 5924
Description
View CDS
External Links
NCBI Taxonomy
Plaza
CAZyDB
Signature Domain  Download full data set without filtering
FamilyStartEndEvalue
GT41943379.4e-25
  DAMVLLTVGSAFVRKGVDRAIDALSSLPEPLKQRCWLLAVGEFESSSNMRAYAEQRGVADRCIEAGGRPDIPALMLGCDLLVHAARSELAGIVLIEAMTA
  GLPLLVTEVCGYASYIKAAQAGKVLASPFSQDSMNHALQEMLKN
Full Sequence
Protein Sequence     Length: 377     Download
MKFAFLIFKY FPYGGVQRDM LRIARDCVAL GHEVTIFTGE WRGDLPPGID VHLLKARGWL    60
NHHRHQSLIR QMQQAVAQGH FDRVVGFNRM PGLDVYFAAD PCYAKRMHHE PWYKKLSGRY    120
RFFSAMEQAV FGTASATHIL LLNQHDQTVF HHWYGTDHAR FHLMPPNIPL QRFTSLPAQD    180
YRAYVRTTFN LPADAMVLLT VGSAFVRKGV DRAIDALSSL PEPLKQRCWL LAVGEFESSS    240
NMRAYAEQRG VADRCIEAGG RPDIPALMLG CDLLVHAARS ELAGIVLIEA MTAGLPLLVT    300
EVCGYASYIK AAQAGKVLAS PFSQDSMNHA LQEMLKNLTT QPWAANAKAF VQQMAATQVS    360
YPEARVIAAT PPGGSRA 
Functional Domains Download unfiltered results here
Cdd IDDomainE-ValueStartEndLengthDomain Description
COG0438RfaG1.0e-201337344+
cd03811GT1_WabH_like1.0e-252360365+
cd03798GT1_wlbH_like5.0e-2610360376+
pfam00534Glycos_transf_13.0e-26197337143+
cd03801GT1_YqgM_like1.0e-384337348+
Gene Ontology
GO TermDescription
GO:0009058biosynthetic process
Annotations - NR Download unfiltered results here
SourceHit IDE-ValueQuery StartQuery EndHit StartHit EndDescription
RefSeqXP_002535158.1013771377glycosyltransferase, putative [Ricinus communis]
RefSeqYP_003049166.1013761380glycosyl transferase group 1 [Methylotenera mobilis JLW8]
RefSeqYP_003051672.1013691370glycosyl transferase group 1 [Methylovorus sp. SIP3-4]
RefSeqYP_544863.1013471359glycosyl transferase, group 1 [Methylobacillus flagellatus KT]
RefSeqYP_793479.1013501351UDP-glucose:(heptosyl) LPS alpha 1,3-glucosyltransferase WaaG [Pseudomonas aeruginosa UCBPP-PA14]
Annotations - PDB Download unfiltered results here
SourceHit IDE-ValueQuery StartQuery EndHit StartHit EndDescription
PDB2iw1_A013501351A Chain A, Crystal Structure Of Waag, A Glycosyltransferase Involved In Lipopolysaccharide Biosynthesis
PDB2iv7_A013501351A Chain A, Crystal Structure Of Waag, A Glycosyltransferase Involved In Lipopolysaccharide Biosynthesis
PDB2jjm_L0.0005162337173350A Chain A, Crystal Structure Of A Family Gt4 Glycosyltransferase From Bacillus Anthracis Orf Ba1558.
PDB2jjm_K0.0005162337173350A Chain A, Crystal Structure Of A Family Gt4 Glycosyltransferase From Bacillus Anthracis Orf Ba1558.
PDB2jjm_J0.0005162337173350A Chain A, Crystal Structure Of A Family Gt4 Glycosyltransferase From Bacillus Anthracis Orf Ba1558.
Hydropathy
EST Download unfiltered results here
HitLengthStartEndEValue
GW435963274603310
GT662582251823290
EY805983276583310
GR7143802141183310
EV1433762141183310
Orthologous Group
SpeciesID
Aquilegia coeruleaAquca_004_00305.1Aquca_053_00022.3Aquca_053_00022.2Aquca_053_00022.1
Arabidopsis lyrata860579323188
Arabidopsis thalianaAT5G01220.1AT3G45100.2AT3G45100.1
Brachypodium distachyonBradi1g59860.1Bradi2g02800.1Bradi1g67200.1Bradi1g32610.1
Brassica rapaBra009633Bra005694Bra009589
Carica papayaevm.model.supercontig_163.3evm.model.supercontig_65.21
Capsella rubellaCarubv10000742mCarubv10019008m
Chlamydomonas reinhardtiiCre01.g038550.t1.3Cre16.g689150.t1.2Cre01.g006800.t1.3
Citrus clementinaCiclev10011473mCiclev10001141mCiclev10001076m
Citrus sinensisorange1.1g022615morange1.1g017114morange1.1g016648morange1.1g009759morange1.1g027511m
Cucumis sativusCucsa.176160.1Cucsa.143020.1
Eucalyptus grandisEucgr.A00516.1Eucgr.J00902.1
Fragaria vescamrna18817.1-v1.0-hybridmrna24819.1-v1.0-hybrid
Glycine maxGlyma03g14200.1Glyma01g27840.1Glyma18g42540.1Glyma07g17680.4Glyma07g17680.3
Glyma07g17680.2Glyma07g17680.1Glyma20g12140.9Glyma20g12140.8Glyma20g12140.7
Glyma20g12140.6Glyma20g12140.5Glyma20g12140.4Glyma20g12140.3Glyma20g12140.2
Glyma20g12140.10Glyma13g25060.1
Gossypium raimondiiGorai.012G112200.2Gorai.012G112200.1Gorai.002G261700.2Gorai.002G261700.6Gorai.002G261700.4
Gorai.002G261700.3Gorai.002G261700.1Gorai.003G143800.9Gorai.003G143800.8Gorai.003G143800.7
Gorai.003G143800.6Gorai.003G143800.5Gorai.003G143800.4Gorai.003G143800.3Gorai.003G143800.2
Gorai.003G143800.10Gorai.003G143800.1
Linum usitatissimumLus10004832Lus10002499Lus10024892Lus10022925
Malus domesticaMDP0000899469MDP0000143617MDP0000297386MDP0000273680MDP0000203472
MDP0000184748MDP0000198677
Manihot esculentacassava4.1_007989mcassava4.1_005643mcassava4.1_032287m
Medicago truncatulaMedtr4g015260.1Medtr7g067340.1
Mimulus guttatusmgv1a004620mmgv1a004551mmgv1a006150mmgv1a006148m
Oryza sativaLOC_Os01g04920.1LOC_Os07g01030.1LOC_Os03g15840.1LOC_Os07g16960.1
Panicum virgatumPavirv00011082mPavirv00023556mPavirv00064963mPavirv00000330mPavirv00022111m
Pavirv00063251mPavirv00030308mPavirv00006595mPavirv00056553mPavirv00006877m
Physcomitrella patensPp1s24_194V6.1Pp1s106_103V6.1
Phaseolus vulgarisPhvul.010G005100.1Phvul.008G106900.1Phvul.005G132400.1Phvul.002G226400.1
Picea abiesMA_158718g0080MA_60607g0010MA_159042g1330MA_159118g0680MA_159090g0090
MA_159042g1140
Populus trichocarpaPotri.016G112600.4Potri.016G112600.3Potri.016G112600.2Potri.016G112600.1Potri.006G097600.3
Potri.006G097600.2Potri.006G097600.1Potri.016G130000.1
Prunus persicappa004263mppa005676mppa018035m
Ricinus communis35899.m00002429969.m00027234675.m00002848584.m00001330418.m000015
32791.m00002229638.m000531
Setaria italicaSi020690mSi001496mSi035897mSi035683m
Selaginella moellendorffii170091406541
Sorghum bicolorSb02g000240.1Sb03g006480.1Sb01g040150.1Sb02g008800.1
Thellungiella halophilaThhalv10013276mThhalv10002532m
Vitis viniferaGSVIVT01033998001GSVIVT01024777001
Volvox carteriVocar20009459mVocar20001320m
Sequence Alignments  (This image is cropped. Click for full image.)
Phylogeny  (This image is cropped. Click for full image.)