| Basic Information | |
|---|---|
| Species | Ricinus communis |
| Cazyme ID | 30771.m000026 |
| Family | CE8 |
| Protein Properties | Length: 189 Molecular Weight: 20334.4 Isoelectric Point: 5.9276 |
| Chromosome | Chromosome/Scaffold: 30771 Start: 1073 End: 1641 |
| Description | Pectin lyase-like superfamily protein |
| View CDS | |
| External Links |
|---|
| NCBI Taxonomy |
| Plaza |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
 | |||
| Family | Start | End | Evalue |
| CE8 | 11 | 186 | 1.69557e-43 |
| VTVAADGSGDFSTVQGALDWVPDNHAGRVTVFVKNGDYEEIVYARNKHDVTVQGESRDGVRIHYANNEVFNPHPPNVGTNELPGTFPSRRAAFALDHVRD MVLDNLTIATTANGQAEGLLLNGERTIVRNVTIEGAGDALQTNGSAYFENIRLTGTGDTILGRGPAYFRHCEIASR | |||
| Full Sequence |
|---|
| Protein Sequence Length: 189 Download |
| ARAPAADARR VTVAADGSGD FSTVQGALDW VPDNHAGRVT VFVKNGDYEE IVYARNKHDV 60 TVQGESRDGV RIHYANNEVF NPHPPNVGTN ELPGTFPSRR AAFALDHVRD MVLDNLTIAT 120 TANGQAEGLL LNGERTIVRN VTIEGAGDAL QTNGSAYFEN IRLTGTGDTI LGRGPAYFRH 180 CEIASRGAF |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
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| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| PLN02671 | PLN02671 | 1.0e-10 | 17 | 185 | 176 | + pectinesterase | ||
| PLN02773 | PLN02773 | 6.0e-11 | 17 | 188 | 180 | + pectinesterase | ||
| PLN02488 | PLN02488 | 2.0e-12 | 17 | 186 | 174 | + probable pectinesterase/pectinesterase inhibitor | ||
| pfam01095 | Pectinesterase | 5.0e-13 | 17 | 186 | 172 | + Pectinesterase. | ||
| COG4677 | PemB | 4.0e-13 | 20 | 188 | 199 | + Pectin methylesterase [Carbohydrate transport and metabolism] | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0005618 | cell wall |
| GO:0030599 | pectinesterase activity |
| GO:0042545 | cell wall modification |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| RefSeq | XP_002536015.1 | 0 | 1 | 189 | 1 | 189 | pectinesterase, putative [Ricinus communis] |
| RefSeq | YP_001299101.1 | 0 | 6 | 177 | 205 | 374 | carbohydrate esterase family 8 protein [Bacteroides vulgatus ATCC 8482] |
| RefSeq | ZP_01060297.1 | 0 | 2 | 189 | 200 | 387 | putative pectinesterase precursor [Leeuwenhoekiella blandensis MED217] |
| RefSeq | ZP_03679295.1 | 0 | 3 | 177 | 199 | 372 | hypothetical protein BACCELL_03651 [Bacteroides cellulosilyticus DSM 14838] |
| RefSeq | ZP_04539752.1 | 0 | 6 | 177 | 196 | 365 | carbohydrate esterase family 8 protein [Bacteroides sp. 9_1_42FAA] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 1xg2_A | 0.000000003 | 13 | 186 | 7 | 171 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
| PDB | 3uw0_A | 0.000000004 | 20 | 186 | 43 | 220 | A Chain A, Pectin Methylesterase From Yersinia Enterocolitica |
| PDB | 1gq8_A | 0.000001 | 11 | 186 | 9 | 175 | A Chain A, Pectin Methylesterase From Carrot |
| PDB | 1qjv_B | 0.00004 | 13 | 186 | 7 | 193 | A Chain A, Pectin Methylesterase Pema From Erwinia Chrysanthemi |
| PDB | 1qjv_A | 0.00004 | 13 | 186 | 7 | 193 | A Chain A, Pectin Methylesterase Pema From Erwinia Chrysanthemi |
| Hydropathy |
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