| Basic Information | |
|---|---|
| Species | Ricinus communis |
| Cazyme ID | 32226.m000022 |
| Family | GH18 |
| Protein Properties | Length: 364 Molecular Weight: 38328.1 Isoelectric Point: 8.8594 |
| Chromosome | Chromosome/Scaffold: 32226 Start: 83 End: 1177 |
| Description | |
| View CDS | |
| External Links |
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| NCBI Taxonomy |
| Plaza |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
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| Family | Start | End | Evalue |
| GH18 | 1 | 176 | 1e-24 |
| MPAGRINIGVPYYTRGWQGVTGGTNGLWGQAALPDQSKCPPGTGGGTVQKCGAGAVGIDNLWHDLDVASKEVPAGSNPLWHTMNLASGRPGSYLAAYGLN PATNPADQLTGTYVRNYDATLVAPWLWNAQKKVFLSIEDEQSLGVKAQYVADRGIGGVMFWEFAGDYAFDTARNEY | |||
| Full Sequence |
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| Protein Sequence Length: 364 Download |
| MPAGRINIGV PYYTRGWQGV TGGTNGLWGQ AALPDQSKCP PGTGGGTVQK CGAGAVGIDN 60 LWHDLDVASK EVPAGSNPLW HTMNLASGRP GSYLAAYGLN PATNPADQLT GTYVRNYDAT 120 LVAPWLWNAQ KKVFLSIEDE QSLGVKAQYV ADRGIGGVMF WEFAGDYAFD TARNEYFIGN 180 TLTALLYNKL KTAPAYGNRL TSATLPAETL DIGFALAGFA LGDSNYPITP KLTLTNNSTQ 240 TLPGGAEFQF DVPTAIPSTV TDQSGFGLTV ISNGSNPSGN NVGGLKSDFH RASFKLPSWQ 300 SLAPGASVTL TINYYLPMPM PSNWTVTFNG RSYALAQEAR RGGVPAAAAA KASTAKAATT 360 AVRK |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
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| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| cd06548 | GH18_chitinase | 0.002 | 1 | 21 | 21 | + The GH18 (glycosyl hydrolases, family 18) type II chitinases hydrolyze chitin, an abundant polymer of N-acetylglucosamine and have been identified in bacteria, fungi, insects, plants, viruses, and protozoan parasites. The structure of this domain is an eight-stranded alpha/beta barrel with a pronounced active-site cleft at the C-terminal end of the beta-barrel. | ||
| cd06548 | GH18_chitinase | 6.0e-18 | 113 | 166 | 54 | + The GH18 (glycosyl hydrolases, family 18) type II chitinases hydrolyze chitin, an abundant polymer of N-acetylglucosamine and have been identified in bacteria, fungi, insects, plants, viruses, and protozoan parasites. The structure of this domain is an eight-stranded alpha/beta barrel with a pronounced active-site cleft at the C-terminal end of the beta-barrel. | ||
| smart00636 | Glyco_18 | 2.0e-20 | 1 | 166 | 166 | + Glyco_18 domain. | ||
| COG3325 | ChiA | 3.0e-30 | 1 | 167 | 167 | + Chitinase [Carbohydrate transport and metabolism] | ||
| pfam06483 | ChiC | 4.0e-74 | 175 | 342 | 168 | + Chitinase C. This ~170 aa region is found at the C-terminus of pfam00704. | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
| GO:0005975 | carbohydrate metabolic process |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| RefSeq | XP_002537642.1 | 0 | 1 | 364 | 1 | 364 | conserved hypothetical protein [Ricinus communis] |
| RefSeq | YP_432439.1 | 0 | 1 | 338 | 615 | 951 | chitinase [Hahella chejuensis KCTC 2396] |
| RefSeq | YP_529449.1 | 0 | 1 | 338 | 726 | 1063 | glycosyl hydrolase family chitinase [Saccharophagus degradans 2-40] |
| RefSeq | ZP_06217446.1 | 0 | 1 | 343 | 371 | 711 | Chitinase [Micromonospora aurantiaca ATCC 27029] |
| RefSeq | ZP_06401482.1 | 0 | 1 | 343 | 371 | 711 | Chitinase [Micromonospora sp. L5] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 1itx_A | 0.00000000004 | 1 | 166 | 294 | 406 | A Chain A, Catalytic Domain Of Chitinase A1 From Bacillus Circulans Wl-12 |
| PDB | 1e6p_B | 0.00000001 | 1 | 228 | 280 | 450 | A Chain A, Catalytic Domain Of Chitinase A1 From Bacillus Circulans Wl-12 |
| PDB | 1e6p_A | 0.00000001 | 1 | 228 | 280 | 450 | A Chain A, Catalytic Domain Of Chitinase A1 From Bacillus Circulans Wl-12 |
| PDB | 1e6n_B | 0.00000001 | 1 | 228 | 280 | 450 | B Chain B, Chitinase B From Serratia Marcescens Inactive Mutant E144q In Complex With N-Acetylglucosamine-Pentamer |
| PDB | 1e6n_A | 0.00000001 | 1 | 228 | 280 | 450 | B Chain B, Chitinase B From Serratia Marcescens Inactive Mutant E144q In Complex With N-Acetylglucosamine-Pentamer |
| Hydropathy |
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