| Basic Information | |
|---|---|
| Species | Arabidopsis lyrata |
| Cazyme ID | 329810 |
| Family | CBM43 |
| Protein Properties | Length: 480 Molecular Weight: 52355.8 Isoelectric Point: 6.0392 |
| Chromosome | Chromosome/Scaffold: 7 Start: 11625580 End: 11627094 |
| Description | O-Glycosyl hydrolases family 17 protein |
| View CDS | |
| External Links |
|---|
| NCBI Taxonomy |
| Plaza |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
 | |||
| Family | Start | End | Evalue |
| CBM43 | 360 | 439 | 1.5e-27 |
| WCVAHPSKDMTQVGDHLRLACSEADCTTLNDGGSCSQLGEKDNISYAFNSYYQMQMQHEKSCDFDGLGMVTFLDPSVGDC | |||
| GH17 | 26 | 339 | 0 |
| IGVNWGTLSFHKMRPSTVVDLLKANKITKVKLFDSNPDALRALMGTGIQVMVGIPNEMLSTLNSDLFVQQNLSRFIDKNGADIRYVAVGNEPFLTGYGGQ FQNYVVPAMVNLQQSLVKANLASYVKLVVPCNADAYESNVPSQGMFRPELTQIMTQLVSFLNTNGSPFVVNIYPFLSLYGNSDFPQDYAFFEGSSHPVPD GPNTYYNAFDGNFDTLVAALTKLGYGQMPIVIGEIGWPTDGAVGANLTAARVFNQGLISHVLSNKGTPLRPGSPPADVYLFGLLDEGAKSTLPGNFERHW GIFSFDGQAKYRLN | |||
| Full Sequence |
|---|
| Protein Sequence Length: 480 Download |
| MGSGVGAVAL CIFFLLLVPH EVESAIGVNW GTLSFHKMRP STVVDLLKAN KITKVKLFDS 60 NPDALRALMG TGIQVMVGIP NEMLSTLNSD LFVQQNLSRF IDKNGADIRY VAVGNEPFLT 120 GYGGQFQNYV VPAMVNLQQS LVKANLASYV KLVVPCNADA YESNVPSQGM FRPELTQIMT 180 QLVSFLNTNG SPFVVNIYPF LSLYGNSDFP QDYAFFEGSS HPVPDGPNTY YNAFDGNFDT 240 LVAALTKLGY GQMPIVIGEI GWPTDGAVGA NLTAARVFNQ GLISHVLSNK GTPLRPGSPP 300 ADVYLFGLLD EGAKSTLPGN FERHWGIFSF DGQAKYRLNL GLGNRGLKNA KNVQYLASRW 360 CVAHPSKDMT QVGDHLRLAC SEADCTTLND GGSCSQLGEK DNISYAFNSY YQMQMQHEKS 420 CDFDGLGMVT FLDPSVGDCR FLVGVTDKGL SSSAEPMARW SIYHICIGVL IWRFWTLTI* 480 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
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| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| COG5309 | COG5309 | 0.002 | 165 | 331 | 176 | + Exo-beta-1,3-glucanase [Carbohydrate transport and metabolism] | ||
| pfam07983 | X8 | 9.0e-20 | 359 | 428 | 77 | + X8 domain. The X8 domain domain contains at least 6 conserved cysteine residues that presumably form three disulphide bridges. The domain is found in an Olive pollen allergen as well as at the C-terminus of several families of glycosyl hydrolases. This domain may be involved in carbohydrate binding. This domain is characteristic of GPI-anchored domains. | ||
| smart00768 | X8 | 2.0e-31 | 360 | 441 | 84 | + Possibly involved in carbohydrate binding. The X8 domain, which may be involved in carbohydrate binding, is found in an Olive pollen antigen as well as at the C terminus of family 17 glycosyl hydrolases. It contains 6 conserved cysteine residues which presumably form three disulfide bridges. | ||
| pfam00332 | Glyco_hydro_17 | 2.0e-73 | 26 | 336 | 318 | + Glycosyl hydrolases family 17. | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
| GO:0005975 | carbohydrate metabolic process |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 3f55_D | 2.8026e-45 | 41 | 340 | 17 | 315 | A Chain A, Crystal Structure Of The Precursor Of Galactose Oxidase |
| PDB | 3f55_C | 2.8026e-45 | 41 | 340 | 17 | 315 | A Chain A, Crystal Structure Of The Precursor Of Galactose Oxidase |
| PDB | 3f55_B | 2.8026e-45 | 41 | 340 | 17 | 315 | A Chain A, Crystal Structure Of The Precursor Of Galactose Oxidase |
| PDB | 3f55_A | 2.8026e-45 | 41 | 340 | 17 | 315 | A Chain A, Crystal Structure Of The Precursor Of Galactose Oxidase |
| PDB | 3em5_D | 2.8026e-45 | 41 | 340 | 17 | 315 | A Chain A, Crystal Structure Of A Native Endo Beta-1,3-Glucanase (Hev B 2), A Major Allergen From Hevea Brasiliensis |
