| Basic Information | |
|---|---|
| Species | Arabidopsis lyrata |
| Cazyme ID | 359476 |
| Family | GH1 |
| Protein Properties | Length: 243 Molecular Weight: 27031.9 Isoelectric Point: 7.2174 |
| Chromosome | Chromosome/Scaffold: 275 Start: 186 End: 2857 |
| Description | beta glucosidase 24 |
| View CDS | |
| External Links |
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| NCBI Taxonomy |
| Plaza |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
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| Family | Start | End | Evalue |
| GH1 | 85 | 242 | 0 |
| IIPFVTVFHWDTPQSLENEYGGFLSANIVKDFREYAEYVFQEYGGKVKHWITFNEPWVFAHAGYDVGKKAPGRCSPYAKERTVKGECLGGRSGYEAYLVS HNLLNAHAEAVEAFRQCEKCKGGKIGIAHSPAWFEPHDFKDAQNGATVDRALDFIMGW | |||
| Full Sequence |
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| Protein Sequence Length: 243 Download |
| MALQKLPLMS IGLLLLLIIV GSPVNADGPV CPPTPSNKLS RAHFPEGFLF GTATAAYQED 60 VQLMKNLNTD AFRLSISWTR IFPRIIPFVT VFHWDTPQSL ENEYGGFLSA NIVKDFREYA 120 EYVFQEYGGK VKHWITFNEP WVFAHAGYDV GKKAPGRCSP YAKERTVKGE CLGGRSGYEA 180 YLVSHNLLNA HAEAVEAFRQ CEKCKGGKIG IAHSPAWFEP HDFKDAQNGA TVDRALDFIM 240 GW* |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
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| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| PLN02998 | PLN02998 | 1.0e-39 | 36 | 242 | 282 | + beta-glucosidase | ||
| PLN02849 | PLN02849 | 1.0e-45 | 36 | 242 | 270 | + beta-glucosidase | ||
| COG2723 | BglB | 7.0e-50 | 44 | 226 | 252 | + Beta-glucosidase/6-phospho-beta-glucosidase/beta-galactosidase [Carbohydrate transport and metabolism] | ||
| TIGR03356 | BGL | 2.0e-50 | 45 | 242 | 264 | + beta-galactosidase. | ||
| pfam00232 | Glyco_hydro_1 | 6.0e-62 | 44 | 242 | 265 | + Glycosyl hydrolase family 1. | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
| GO:0005975 | carbohydrate metabolic process |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 3ptq_B | 0 | 39 | 242 | 29 | 296 | A Chain A, Crystal Structure Of The Polygalacturonase From Colletotrichum Lupini And Its Implications For The Interaction With Polygalacturonase- Inhibiting Proteins |
| PDB | 3ptq_A | 0 | 39 | 242 | 29 | 296 | A Chain A, Crystal Structure Of The Polygalacturonase From Colletotrichum Lupini And Its Implications For The Interaction With Polygalacturonase- Inhibiting Proteins |
| PDB | 3ptm_B | 0 | 39 | 242 | 29 | 296 | A Chain A, Crystal Structure Of The Polygalacturonase From Colletotrichum Lupini And Its Implications For The Interaction With Polygalacturonase- Inhibiting Proteins |
| PDB | 3ptm_A | 0 | 39 | 242 | 29 | 296 | A Chain A, Crystal Structure Of The Polygalacturonase From Colletotrichum Lupini And Its Implications For The Interaction With Polygalacturonase- Inhibiting Proteins |
| PDB | 3ptk_B | 0 | 39 | 242 | 29 | 296 | A Chain A, The Crystal Structure Of Rice (Oryza Sativa L.) Os4bglu12 |
| Signal Peptide | |||||
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| Cleavage Site | |||||
| 26 | |||||
| Hydropathy |
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| Orthologous Group | |||||
|---|---|---|---|---|---|
| Species | ID | ||||
| Arabidopsis lyrata | 920911 | ||||
| Sequence Alignments (This image is cropped. Click for full image.) |
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| Phylogeny |
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