CAZyme Information

Basic Information
SpeciesArabidopsis lyrata
Cazyme ID492915
FamilyGT4
Protein PropertiesLength: 493 Molecular Weight: 55202.2 Isoelectric Point: 8.3555
ChromosomeChromosome/Scaffold: 7 Start: 10199045 End: 10200686
DescriptionUDP-Glycosyltransferase superfamily protein
View CDS
External Links
NCBI Taxonomy
Plaza
CAZyDB
Signature Domain  Download full data set without filtering
FamilyStartEndEvalue
GT43094422.6e-25
  SAIVLGAAGRLVKDKGHPLLFEAFAKLIETHSNVYLVVAGSGPWEQRYKELGEKVSILGSLNPHELKGFYNGIDLFVNPTLRPQGLDLTLMEAMLSGKPV
  MASRYASIKRSIVVNDEFGFMFAPNVEALTAVME
Full Sequence
Protein Sequence     Length: 493     Download
MASQTKIKKP NSHFSLCTFL FFTVLFTIPA LFLLRTSSCS SSTAAVSSSS DTNQPPWSGD    60
LQTAQFAWNR LDFSLTNPPP KTLKLAVFSR KWPTGPNPGG MERHAFTLYT ALARRGHRVH    120
VFTSPLDQSP ETNKIPPVSD QILYPIIHSH GDAEPGKWRY NKAWELYQEE NKREPFDAVH    180
SESVALPHWI AREVPNLAVS WHGIALESLQ SSIYQDLIRK PDEPRSQGFN ASLYGAVLPK    240
ILDEIRFFHN YAHHIAISDS CGEMLRDVYQ IPEKRVHVIL NGVDENGFTS DKKLRSLFRS    300
KLGLPENSSA IVLGAAGRLV KDKGHPLLFE AFAKLIETHS NVYLVVAGSG PWEQRYKELG    360
EKVSILGSLN PHELKGFYNG IDLFVNPTLR PQGLDLTLME AMLSGKPVMA SRYASIKRSI    420
VVNDEFGFMF APNVEALTAV MEVAVAEGTE RLAERGRKCK EYAAEMFTAS KMALAYERLF    480
LCINDQKFCI YH* 
Functional Domains Download unfiltered results here
Cdd IDDomainE-ValueStartEndLengthDomain Description
cd03807GT1_WbnK_like2.0e-36246480244+
TIGR00032argG5.0e-4096479402+
cd03811GT1_WabH_like3.0e-4099469383+
cd03798GT1_wlbH_like2.0e-4596480404+
cd03801GT1_YqgM_like4.0e-6684480409+
Gene Ontology
GO TermDescription
GO:0009058biosynthetic process
Annotations - NR Download unfiltered results here
SourceHit IDE-ValueQuery StartQuery EndHit StartHit EndDescription
GenBankAAM65716.1014911492unknown [Arabidopsis thaliana]
EMBLCAA16923.2014741475putative protein [Arabidopsis thaliana]
RefSeqNP_567589.10149124515glycosyl transferase family 1 protein [Arabidopsis thaliana]
RefSeqXP_002303479.1014921489predicted protein [Populus trichocarpa]
RefSeqXP_002519899.1014912485glycosyltransferase, putative [Ricinus communis]
Annotations - PDB Download unfiltered results here
SourceHit IDE-ValueQuery StartQuery EndHit StartHit EndDescription
PDB3oka_B0.0000003281410170308A Chain A, Crystal Structure Of Corynebacterium Glutamicum Pimb' In Complex With Gdp-Man (Triclinic Crystal Form)
PDB3oka_A0.0000003281410170308A Chain A, Crystal Structure Of Corynebacterium Glutamicum Pimb' In Complex With Gdp-Man (Triclinic Crystal Form)
PDB3okp_A0.0000003281410170308A Chain A, Crystal Structure Of Corynebacterium Glutamicum Pimb' In Complex With Gdp-Man (Triclinic Crystal Form)
PDB3okc_A0.0000003281410170308A Chain A, Crystal Structure Of Corynebacterium Glutamicum Pimb' Bound To Gdp (Orthorhombic Crystal Form)
PDB3c4v_B0.00001269430183353A Chain A, Crystal Structure Of Corynebacterium Glutamicum Pimb' Bound To Gdp (Orthorhombic Crystal Form)
Transmembrane Domains
StartEnd
1234
Hydropathy
EST Download unfiltered results here
HitLengthStartEndEValue
FY44075428912880
FG5599982302564850
DK5196382262664910
BX8362652691163840
BX836265383994350.0000000002
Orthologous Group
SpeciesID
Aquilegia coeruleaAquca_055_00071.1Aquca_004_00554.1
Arabidopsis lyrata316266919149
Arabidopsis thalianaAT1G73160.1AT5G59070.1AT4G19460.1
Brachypodium distachyonBradi2g45370.1
Brassica rapaBra012542Bra003857Bra013399Bra020331
Carica papayaevm.model.supercontig_305.3
Capsella rubellaCarubv10004612mCarubv10021524m
Citrus clementinaCiclev10008126mCiclev10003490m
Citrus sinensisorange1.1g039338morange1.1g044542m
Cucumis sativusCucsa.268510.1
Eucalyptus grandisEucgr.E01172.1Eucgr.F03250.1
Fragaria vescamrna27708.1-v1.0-hybridmrna27178.1-v1.0-hybrid
Glycine maxGlyma09g34990.1Glyma01g35440.1Glyma16g17250.1Glyma16g08210.1
Gossypium raimondiiGorai.009G372800.1Gorai.008G217900.1
Linum usitatissimumLus10032187Lus10014499Lus10033297Lus10034760
Malus domesticaMDP0000252217MDP0000510770MDP0000280727MDP0000690085
Manihot esculentacassava4.1_023608mcassava4.1_022788m
Medicago truncatulaMedtr5g026360.1Medtr8g071900.1
Mimulus guttatusmgv1a005617mmgv1a027119m
Oryza sativaLOC_Os01g46430.1
Panicum virgatumPavirv00039421mPavirv00050283m
Physcomitrella patensPp1s115_97V6.1Pp1s115_97V6.2Pp1s231_59V6.1
Phaseolus vulgarisPhvul.002G124600.1Phvul.003G277200.1
Picea abiesMA_159118g0690MA_58772g0010
Populus trichocarpaPotri.011G097000.1Potri.003G105500.1Potri.001G128300.1
Prunus persicappa004871mppa024212m
Ricinus communis30150.m00047029827.m002616
Setaria italicaSi001150m
Selaginella moellendorffii79637
Sorghum bicolorSb03g029770.1
Thellungiella halophilaThhalv10013459mThhalv10027268mThhalv10019571m
Vitis viniferaGSVIVT01036920001GSVIVT01036921001GSVIVT01036924001
Sequence Alignments  (This image is cropped. Click for full image.)
Phylogeny