CAZyme Information

Basic Information
SpeciesRicinus communis
Cazyme ID55201.m000024
FamilyGT4
Protein PropertiesLength: 247 Molecular Weight: 27324.2 Isoelectric Point: 8.944
ChromosomeChromosome/Scaffold: 55201 Start: 17 End: 760
Description
View CDS
External Links
NCBI Taxonomy
Plaza
CAZyDB
Signature Domain  Download full data set without filtering
FamilyStartEndEvalue
GT4562057.5e-30
  PTRQPTLIYFGRWSVNKGLREALQVLRALRARDAAWSLTIAGREYDYRAADLHALAAEFGVDEAVRLVASPSDAELRTLMHSASYFICLSQHEGFGLAAV
  EAMSAGLIPLLSAIPPFQKLAKDTGVPLLLKADPTRAAAAIQALHERPET
Full Sequence
Protein Sequence     Length: 247     Download
MLFFNTVTRF TSRGYARVLA TSTNDGEIFA RIIRDERLRV IENGVDIDKY ADAAAPTRQP    60
TLIYFGRWSV NKGLREALQV LRALRARDAA WSLTIAGREY DYRAADLHAL AAEFGVDEAV    120
RLVASPSDAE LRTLMHSASY FICLSQHEGF GLAAVEAMSA GLIPLLSAIP PFQKLAKDTG    180
VPLLLKADPT RAAAAIQALH ERPETDHTAL REHARLQARR FSWRTVVDAY VAEYERAAAP    240
ATARSLI 
Functional Domains Download unfiltered results here
Cdd IDDomainE-ValueStartEndLengthDomain Description
cd03798GT1_wlbH_like2.0e-219228241+
cd03809GT1_mtfB_like2.0e-2333228206+
pfam00534Glycos_transf_17.0e-2459221165+
COG0438RfaG4.0e-251228233+
cd03801GT1_YqgM_like2.0e-273228239+
Gene Ontology
GO TermDescription
GO:0009058biosynthetic process
Annotations - NR Download unfiltered results here
SourceHit IDE-ValueQuery StartQuery EndHit StartHit EndDescription
GenBankEFF46125.102237133369GumH protein [Xanthomonas fuscans subsp. aurantifolii str. ICPB 10535]
RefSeqNP_642893.102237133369GumH protein [Xanthomonas axonopodis pv. citri str. 306]
RefSeqXP_002538574.1012471247glycosyltransferase, putative [Ricinus communis]
RefSeqZP_06483327.102237133369GumH protein [Xanthomonas campestris pv. vasculorum NCPPB702]
RefSeqZP_06489774.102237133369GumH protein [Xanthomonas campestris pv. musacearum NCPPB4381]
Annotations - PDB Download unfiltered results here
SourceHit IDE-ValueQuery StartQuery EndHit StartHit EndDescription
PDB3fro_C0.000000002131234324427A Chain A, Crystal Structure Of Pyrococcus Abyssi Glycogen Synthase With Open And Closed Conformations
PDB3fro_B0.000000002131234324427A Chain A, Crystal Structure Of Pyrococcus Abyssi Glycogen Synthase With Open And Closed Conformations
PDB3fro_A0.000000002131234324427A Chain A, Crystal Structure Of Pyrococcus Abyssi Glycogen Synthase With Open And Closed Conformations
PDB2bis_C0.000000002131234325428A Chain A, Structure Of Glycogen Synthase From Pyrococcus Abyssi
PDB2bis_B0.000000002131234325428A Chain A, Structure Of Glycogen Synthase From Pyrococcus Abyssi
Hydropathy
EST Download unfiltered results here
HitLengthStartEndEValue
GE267958152601990.00006
FG009414188492220.002
FG061601188492220.005
EC145477141611890.006
HS4119731051222230.008
Orthologous Group
SpeciesID
Picea abiesMA_158718g0050
Sequence Alignments  (This image is cropped. Click for full image.)
Phylogeny