CAZyme Information

Basic Information
SpeciesArabidopsis lyrata
Cazyme ID870009
FamilyCE8
Protein PropertiesLength: 307 Molecular Weight: 34809.8 Isoelectric Point: 10.0501
View CDS
External Links
NCBI Taxonomy
Plaza
CAZyDB
Signature Domain  Download full data set without filtering
FamilyStartEndEvalue
CE82193023.1e-24
  TGKLWLGRAWKPFATVVFLNTYMSGIISPDGWNNMSDPTRDKTAYYREHQYYIPEAKHSKRVPYAKQLTDVEAAPFTNISFIDG
CE8322140
  TVDLHGSGNFISVQRAINAVPNSSNYKTLIIVKSGVYNIMYVPWKKKREKVNVSEKKKKLVLHGTDYQNTVIELNDTAQSSRNTLNSYSFDVFAANFVAY
  NISFKRVLFFVGLEKNFAPEPKPGMEGSQAVALRVDGDQAAFYSFGFYGAQDTLLDNQGRHFFKNCFIQGSIDFIFRNGRSLY
Full Sequence
Protein Sequence     Length: 307     Download
MSIKIIFTIT IASFFSTISS LKPHSRFALV FTVDLHGSGN FISVQRAINA VPNSSNYKTL    60
IIVKSGVYNI MYVPWKKKRE KVNVSEKKKK LVLHGTDYQN TVIELNDTAQ SSRNTLNSYS    120
FDVFAANFVA YNISFKRVLF FVGLEKNFAP EPKPGMEGSQ AVALRVDGDQ AAFYSFGFYG    180
AQDTLLDNQG RHFFKNCFIQ GSIDFIFRNG RSLYKIYGTG KLWLGRAWKP FATVVFLNTY    240
MSGIISPDGW NNMSDPTRDK TAYYREHQYY IPEAKHSKRV PYAKQLTDVE AAPFTNISFI    300
DGEQRL* 
Functional Domains Download unfiltered results here
Cdd IDDomainE-ValueStartEndLengthDomain Description
PLN02480PLN024804.0e-6233306311+
PLN02432PLN024321.0e-6628306313+
PLN02665PLN026654.0e-6830302309+
PLN02682PLN026821.0e-8337304308+
PLN02304PLN023041.0e-9330306319+
Gene Ontology
GO TermDescription
GO:0005618cell wall
GO:0030599pectinesterase activity
GO:0042545cell wall modification
Annotations - NR Download unfiltered results here
SourceHit IDE-ValueQuery StartQuery EndHit StartHit EndDescription
GenBankAAO22722.101930679385putative pectinesterase family protein [Arabidopsis thaliana]
RefSeqNP_181208.102330634333pectinesterase family protein [Arabidopsis thaliana]
RefSeqNP_181209.101930679385pectinesterase family protein [Arabidopsis thaliana]
RefSeqXP_002264941.103030614309PREDICTED: hypothetical protein [Vitis vinifera]
RefSeqXP_002326223.102630614313predicted protein [Populus trichocarpa]
Annotations - PDB Download unfiltered results here
SourceHit IDE-ValueQuery StartQuery EndHit StartHit EndDescription
PDB1gq8_A4e-283330611308A Chain A, Pectin Methylesterase From Carrot
PDB1xg2_A2e-19333027300B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein
PDB3uw0_A0.0000000014121444212A Chain A, Pectin Methylesterase From Yersinia Enterocolitica
PDB2ntq_B0.0000000034129518329A Chain A, Pectin Methylesterase From Yersinia Enterocolitica
PDB2ntq_A0.0000000034129518329A Chain A, Pectin Methylesterase From Yersinia Enterocolitica
Hydropathy
EST Download unfiltered results here
HitLengthStartEndEValue
EE623451266823060
EX093174258282460
EE616069261823010
EE623529248822880
DY831730260803030
Orthologous Group
SpeciesID
Arabidopsis lyrata870009.219.302870009.219.302
Brassica rapaBra015416.190.273Bra015416.190.273Bra021217
Carica papayaevm.model.supercontig_26.307.120.240evm.model.supercontig_26.307.120.240evm.model.supercontig_3.29
Capsella rubellaCarubv10022232mCarubv10012537mCarubv10015938m
Citrus sinensisorange1.1g039106m.201.336orange1.1g039106m.201.336
Cucumis sativusCucsa.090570.1.128.230Cucsa.090570.1.128.230
Eucalyptus grandisEucgr.K02430.1
Glycine maxGlyma10g01355.1.136.260Glyma02g09535.1.161.286Glyma02g09535.1.161.286Glyma02g01310.2Glyma10g01355.1.136.260
Gossypium raimondiiGorai.009G272800.1.123.221Gorai.009G272800.1.123.221
Linum usitatissimumLus10036006
Malus domesticaMDP0000753730MDP0000935763MDP0000206418MDP0000161415
Medicago truncatulaMedtr7g102570.1
Mimulus guttatusmgv1a018901mmgv1a025103m.137.229mgv1a025103m.137.229
Oryza sativaLOC_Os02g46310.1
Panicum virgatumPavirv00020445m.249.342Pavirv00017728mPavirv00020445m.249.342Pavirv00029452m
Physcomitrella patensPp1s446_3V6.1.278.400Pp1s446_3V6.1.278.400
Picea abiesMA_10428207g0020MA_7274893g0010MA_10431784g0010
Populus trichocarpaPotri.011G042200.1
Ricinus communis30076.m004630
Vitis viniferaGSVIVT01001104001.139.220GSVIVT01001104001.139.220
Sequence Alignments  (This image is cropped. Click for full image.)
Phylogeny