Basic Information | |
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Species | Arabidopsis lyrata |
Cazyme ID | 870009 |
Family | CE8 |
Protein Properties | Length: 307 Molecular Weight: 34809.8 Isoelectric Point: 10.0501 |
View CDS |
External Links |
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NCBI Taxonomy |
Plaza |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
CE8 | 219 | 302 | 3.1e-24 |
TGKLWLGRAWKPFATVVFLNTYMSGIISPDGWNNMSDPTRDKTAYYREHQYYIPEAKHSKRVPYAKQLTDVEAAPFTNISFIDG | |||
CE8 | 32 | 214 | 0 |
TVDLHGSGNFISVQRAINAVPNSSNYKTLIIVKSGVYNIMYVPWKKKREKVNVSEKKKKLVLHGTDYQNTVIELNDTAQSSRNTLNSYSFDVFAANFVAY NISFKRVLFFVGLEKNFAPEPKPGMEGSQAVALRVDGDQAAFYSFGFYGAQDTLLDNQGRHFFKNCFIQGSIDFIFRNGRSLY |
Full Sequence |
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Protein Sequence Length: 307 Download |
MSIKIIFTIT IASFFSTISS LKPHSRFALV FTVDLHGSGN FISVQRAINA VPNSSNYKTL 60 IIVKSGVYNI MYVPWKKKRE KVNVSEKKKK LVLHGTDYQN TVIELNDTAQ SSRNTLNSYS 120 FDVFAANFVA YNISFKRVLF FVGLEKNFAP EPKPGMEGSQ AVALRVDGDQ AAFYSFGFYG 180 AQDTLLDNQG RHFFKNCFIQ GSIDFIFRNG RSLYKIYGTG KLWLGRAWKP FATVVFLNTY 240 MSGIISPDGW NNMSDPTRDK TAYYREHQYY IPEAKHSKRV PYAKQLTDVE AAPFTNISFI 300 DGEQRL* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
PLN02480 | PLN02480 | 4.0e-62 | 33 | 306 | 311 | + Probable pectinesterase | ||
PLN02432 | PLN02432 | 1.0e-66 | 28 | 306 | 313 | + putative pectinesterase | ||
PLN02665 | PLN02665 | 4.0e-68 | 30 | 302 | 309 | + pectinesterase family protein | ||
PLN02682 | PLN02682 | 1.0e-83 | 37 | 304 | 308 | + pectinesterase family protein | ||
PLN02304 | PLN02304 | 1.0e-93 | 30 | 306 | 319 | + probable pectinesterase |
Gene Ontology | |
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GO Term | Description |
GO:0005618 | cell wall |
GO:0030599 | pectinesterase activity |
GO:0042545 | cell wall modification |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | AAO22722.1 | 0 | 19 | 306 | 79 | 385 | putative pectinesterase family protein [Arabidopsis thaliana] |
RefSeq | NP_181208.1 | 0 | 23 | 306 | 34 | 333 | pectinesterase family protein [Arabidopsis thaliana] |
RefSeq | NP_181209.1 | 0 | 19 | 306 | 79 | 385 | pectinesterase family protein [Arabidopsis thaliana] |
RefSeq | XP_002264941.1 | 0 | 30 | 306 | 14 | 309 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002326223.1 | 0 | 26 | 306 | 14 | 313 | predicted protein [Populus trichocarpa] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1gq8_A | 4e-28 | 33 | 306 | 11 | 308 | A Chain A, Pectin Methylesterase From Carrot |
PDB | 1xg2_A | 2e-19 | 33 | 302 | 7 | 300 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
PDB | 3uw0_A | 0.000000001 | 41 | 214 | 44 | 212 | A Chain A, Pectin Methylesterase From Yersinia Enterocolitica |
PDB | 2ntq_B | 0.000000003 | 41 | 295 | 18 | 329 | A Chain A, Pectin Methylesterase From Yersinia Enterocolitica |
PDB | 2ntq_A | 0.000000003 | 41 | 295 | 18 | 329 | A Chain A, Pectin Methylesterase From Yersinia Enterocolitica |
EST Download unfiltered results here | ||||
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Hit | Length | Start | End | EValue |
EE623451 | 266 | 82 | 306 | 0 |
EX093174 | 258 | 28 | 246 | 0 |
EE616069 | 261 | 82 | 301 | 0 |
EE623529 | 248 | 82 | 288 | 0 |
DY831730 | 260 | 80 | 303 | 0 |
Sequence Alignments (This image is cropped. Click for full image.) |
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