| Basic Information | |
|---|---|
| Species | Arabidopsis lyrata |
| Cazyme ID | 897369 |
| Family | GT4 |
| Protein Properties | Length: 809 Molecular Weight: 91726.2 Isoelectric Point: 8.0416 |
| View CDS | |
| External Links |
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| NCBI Taxonomy |
| Plaza |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
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| Family | Start | End | Evalue |
| GT4 | 571 | 672 | 3.4e-21 |
| YFLGKMVWAKGYRELIDLMAKHKSELGSFNLDVYGNGEDAVEVQRAAKKHDLNLNFLKGRDHADDALHKYKVFINPSISDVLCTATAEALAMGKFVVCAD HP | |||
| Full Sequence |
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| Protein Sequence Length: 809 Download |
| MVKETLIPPS STSMATGTAT SSSLSMTLSS TNALSFLSKG WREVWDSADA DLQLMRDRAN 60 SVKNLASTFD REIENFLNNS ARSAFPVGSP SASSFSSEIG IMKKLQPKIS EFRRVYSAPE 120 ISRKVMERWG PARAKLGMDL SAIKKAIVSE MELDERQGVL EMGRLRRRRN SDRVRFTEFF 180 AEAERDGEGN FGDWEPIRSL KTRFKEFEKR NSLEILSGFK NSEFVEKLKT SFKSIYKETD 240 EAKDVPPLDV PELLACLVRQ SEPFLDQIGV RKDMCDRIVE SLCKCKSQHL WRLPSAQASD 300 LIENDNHGVD LDMRIASVLQ STGHHYDGGF WTDFVKPETS ENKRHVAIVT TASLPWMTGT 360 AVNPLFRAAY LAKSAKQSVT LVVPWLCESD QELVYPNNLT FSSPEEQESY IRKWLEERIG 420 FKADFKISFY PGKFSKERRS IFPAGDTSQF ISSKDADIAI LEEPEHLNWY HHGKRWTDKF 480 NHVVGIVHTN YLEYIKREKN GALQAFFVNH VNNWVTRAYC DKVLRLSGAT QDLPKSVVCN 540 VHGVNPKFLM IGGKIAEERS RGEQAFSKGA YFLGKMVWAK GYRELIDLMA KHKSELGSFN 600 LDVYGNGEDA VEVQRAAKKH DLNLNFLKGR DHADDALHKY KVFINPSISD VLCTATAEAL 660 AMGKFVVCAD HPSNEFFRSF PNCLTYKTSE DFVSKVKEAM TKEPLPLTPE QMYNLSWEAA 720 TQRFMEYSDL DKILNDGDGG RRMRKSRSVP SFNEMVDGGL AFTHYVLTGN DFLRLCTGAT 780 PRTKDYDKQH CKDLNLVPPH VHKPIFGW* |
| Functional Domains Download unfiltered results here | ||||||||
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| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| TIGR00032 | argG | 4.0e-9 | 472 | 736 | 291 | + argininosuccinate synthase. argG in bacteria, ARG1 in Saccharomyces cerevisiae. There is a very unusual clustering in the alignment, with a deep split between one cohort of E. coli, H. influenzae, and Streptomyces, and the other cohort of eukaryotes, archaea, and the rest of the eubacteria [Amino acid biosynthesis, Glutamate family]. | ||
| pfam00534 | Glycos_transf_1 | 2.0e-10 | 572 | 706 | 142 | + Glycosyl transferases group 1. Mutations in this domain of human PIGA lead to disease (Paroxysmal Nocturnal haemoglobinuria). Members of this family transfer activated sugars to a variety of substrates, including glycogen, Fructose-6-phosphate and lipopolysaccharides. Members of this family transfer UDP, ADP, GDP or CMP linked sugars. The eukaryotic glycogen synthases may be distant members of this family. | ||
| COG0438 | RfaG | 7.0e-11 | 344 | 727 | 402 | + Glycosyltransferase [Cell envelope biogenesis, outer membrane] | ||
| PLN02501 | PLN02501 | 0 | 36 | 808 | 782 | + digalactosyldiacylglycerol synthase | ||
| PLN02846 | PLN02846 | 0 | 343 | 799 | 458 | + digalactosyldiacylglycerol synthase | ||
| Gene Ontology | |
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| GO Term | Description |
| GO:0009058 | biosynthetic process |
| Annotations - NR Download unfiltered results here | |||||||
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| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| RefSeq | NP_187773.1 | 0 | 1 | 808 | 1 | 808 | DGD1 (DIGALACTOSYL DIACYLGLYCEROL DEFICIENT 1); UDP-galactosyltransferase/ galactolipid galactosyltransferase/ transferase, transferring glycosyl groups [Arabidopsis thaliana] |
| RefSeq | NP_850561.1 | 0 | 1 | 639 | 1 | 639 | DGD1 (DIGALACTOSYL DIACYLGLYCEROL DEFICIENT 1); UDP-galactosyltransferase/ galactolipid galactosyltransferase/ transferase, transferring glycosyl groups [Arabidopsis thaliana] |
| Swiss-Prot | Q6DW74 | 0 | 29 | 808 | 9 | 786 | DGDG1_LOTJA RecName: Full=Digalactosyldiacylglycerol synthase 1, chloroplastic; Flags: Precursor |
| RefSeq | XP_002323386.1 | 0 | 19 | 808 | 3 | 793 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002533901.1 | 0 | 30 | 808 | 9 | 797 | galactolipid galactosyltransferase, putative [Ricinus communis] |
| Annotations - PDB Download unfiltered results here | |||||||
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| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 2l7c_A | 0.003 | 564 | 582 | 1 | 19 | A Chain A, Biophysical Studies Of Lipid Interacting Regions Of Dgd2 In Arabidopsis Thaliana |
| Hydropathy |
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| EST Download unfiltered results here | ||||
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| Hit | Length | Start | End | EValue |
| HO795393 | 404 | 415 | 809 | 0 |
| GO850017 | 333 | 336 | 668 | 0 |
| GO850146 | 328 | 395 | 722 | 0 |
| GO871962 | 321 | 340 | 660 | 0 |
| GO876235 | 346 | 342 | 685 | 0 |
| Sequence Alignments (This image is cropped. Click for full image.) |
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| Phylogeny |
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