| Basic Information | |
|---|---|
| Species | Arabidopsis lyrata |
| Cazyme ID | 910127 |
| Family | CBM43 |
| Protein Properties | Length: 500 Molecular Weight: 54301.8 Isoelectric Point: 8.5851 |
| View CDS | |
| External Links |
|---|
| NCBI Taxonomy |
| Plaza |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
 | |||
| Family | Start | End | Evalue |
| CBM43 | 375 | 455 | 3.8e-24 |
| WCVLSTQAAGNGAWQAPATYACQNADCTSLGPGSSCAALDPTANASYAFNMYFQKMDHRRGSCDFNNLGVLTKIDPSSGSC | |||
| GH17 | 31 | 355 | 0 |
| ACNWGTQASHPLPPNIVVKLLRDNGFNKVKLFEADPGALRALGKSGIQVMVGIPNNLLETMASTVTNAELWVQQNVSQYISRYGTDIRYVAVGNEPFLKT YKDRFVRATYPALQNVQAALVKAGLGRQVKVTVPLNADVYESGDGLPSSGDFRSDIKTLMVSIVRFLANSVSPITFNIYPFLSLNADPNFPREYAFFPKG GGGGGAKPVVDGSISYTNVFDANFDTLVSALEKNGFDPNKIEIIVGEVGWPTDGDQNANPAMAQRFNQGLLNRILQGQGTPRRRTAPEVFLFSLVDEDAK SIDPGKFERHWGIFSYDGTVKYPLS | |||
| Full Sequence |
|---|
| Protein Sequence Length: 500 Download |
| MGRHDTYQKL IFFCLSILLL HNISKNVEGL ACNWGTQASH PLPPNIVVKL LRDNGFNKVK 60 LFEADPGALR ALGKSGIQVM VGIPNNLLET MASTVTNAEL WVQQNVSQYI SRYGTDIRYV 120 AVGNEPFLKT YKDRFVRATY PALQNVQAAL VKAGLGRQVK VTVPLNADVY ESGDGLPSSG 180 DFRSDIKTLM VSIVRFLANS VSPITFNIYP FLSLNADPNF PREYAFFPKG GGGGGAKPVV 240 DGSISYTNVF DANFDTLVSA LEKNGFDPNK IEIIVGEVGW PTDGDQNANP AMAQRFNQGL 300 LNRILQGQGT PRRRTAPEVF LFSLVDEDAK SIDPGKFERH WGIFSYDGTV KYPLSLGNGR 360 PLVPAKGVRY LAREWCVLST QAAGNGAWQA PATYACQNAD CTSLGPGSSC AALDPTANAS 420 YAFNMYFQKM DHRRGSCDFN NLGVLTKIDP SSGSCRFPIE IDTSRQQMLK PPPRNSGASE 480 ANCRLAAAVA MVIGLVFSN* |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
 | ||||||||
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| COG5309 | COG5309 | 1.0e-7 | 268 | 347 | 84 | + Exo-beta-1,3-glucanase [Carbohydrate transport and metabolism] | ||
| pfam07983 | X8 | 3.0e-11 | 375 | 444 | 77 | + X8 domain. The X8 domain domain contains at least 6 conserved cysteine residues that presumably form three disulphide bridges. The domain is found in an Olive pollen allergen as well as at the C-terminus of several families of glycosyl hydrolases. This domain may be involved in carbohydrate binding. This domain is characteristic of GPI-anchored domains. | ||
| smart00768 | X8 | 1.0e-25 | 375 | 457 | 85 | + Possibly involved in carbohydrate binding. The X8 domain, which may be involved in carbohydrate binding, is found in an Olive pollen antigen as well as at the C terminus of family 17 glycosyl hydrolases. It contains 6 conserved cysteine residues which presumably form three disulfide bridges. | ||
| pfam00332 | Glyco_hydro_17 | 1.0e-68 | 30 | 355 | 328 | + Glycosyl hydrolases family 17. | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
| GO:0005975 | carbohydrate metabolic process |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| EMBL | CBI27737.1 | 0 | 29 | 493 | 24 | 482 | unnamed protein product [Vitis vinifera] |
| RefSeq | NP_197587.1 | 0 | 1 | 499 | 1 | 501 | glycosyl hydrolase family 17 protein [Arabidopsis thaliana] |
| RefSeq | XP_002277217.1 | 0 | 31 | 493 | 18 | 474 | PREDICTED: hypothetical protein [Vitis vinifera] |
| RefSeq | XP_002309443.1 | 0 | 29 | 459 | 1 | 425 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002516181.1 | 0 | 10 | 497 | 22 | 499 | Glucan endo-1,3-beta-glucosidase precursor, putative [Ricinus communis] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 1ghr_A | 0 | 34 | 356 | 5 | 306 | A Chain A, Crystal Structure Of Wild-Type E.Coli Gs In Complex With Adp And Glucose(Wtgsb) |
| PDB | 1aq0_B | 0 | 34 | 356 | 5 | 306 | A Chain A, Barley 1,3-1,4-Beta-Glucanase In Monoclinic Space Group |
| PDB | 1aq0_A | 0 | 34 | 356 | 5 | 306 | A Chain A, Barley 1,3-1,4-Beta-Glucanase In Monoclinic Space Group |
| PDB | 3f55_D | 5.99994e-41 | 34 | 356 | 6 | 315 | A Chain A, Barley 1,3-1,4-Beta-Glucanase In Monoclinic Space Group |
| PDB | 3f55_C | 5.99994e-41 | 34 | 356 | 6 | 315 | A Chain A, Barley 1,3-1,4-Beta-Glucanase In Monoclinic Space Group |
