| Basic Information | |
|---|---|
| Species | Brassica rapa |
| Cazyme ID | Bra015827 |
| Family | GH9 |
| Protein Properties | Length: 528 Molecular Weight: 57897.7 Isoelectric Point: 6.7931 |
| Chromosome | Chromosome/Scaffold: 07 Start: 20671340 End: 20673973 |
| Description | glycosyl hydrolase 9B7 |
| View CDS | |
| External Links |
|---|
| NCBI Taxonomy |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
 | |||
| Family | Start | End | Evalue |
| GH9 | 59 | 513 | 0 |
| KYADALKLALQFFDIQKSGKLVNNTIPWRGDSGLKDGSEANLDLSKGLYDAGDHIKFGFPMAFTATVLSWSILEYADQMDAVNLLDPAKDSLKWTTDYFV KAHPSDNVLYIQVGDPEVDHPCWERPETMKGKRPVIKIDADTPGTEVAAETAAAMASASLVFKDSDPRYSATLLKHARQLFDFADSKRGLYSVNIPEVQK FYNSTGYGDELLWAASWLYHATEEKTYLDYVTKHGNEFASFGNPTWFSWDDKLAGTQVLLSRLLFFKKDLSGSKALASYRGTAKAVMCGLLPKSPTATGS RSNSGLVLVSDWNPLQQSVSAAFLASLFSDYMLTSRIHKISCNGKIFKATELRDFAKSQADYILGKNPMGMSFVVGYGDKYPEYIHHRGASIPADATTGC LDEFKYFNSTKPNPNIAYGALVGGPYLNETFSDSRENVRQNEPTTYNNALLVGLL | |||
| Full Sequence |
|---|
| Protein Sequence Length: 528 Download |
| MGEKSKSRGC FGWFIALIVL AAVILAVVYM VKSKMKKPDD NDDNEAGPVP GPPGAIDKKY 60 ADALKLALQF FDIQKSGKLV NNTIPWRGDS GLKDGSEANL DLSKGLYDAG DHIKFGFPMA 120 FTATVLSWSI LEYADQMDAV NLLDPAKDSL KWTTDYFVKA HPSDNVLYIQ VGDPEVDHPC 180 WERPETMKGK RPVIKIDADT PGTEVAAETA AAMASASLVF KDSDPRYSAT LLKHARQLFD 240 FADSKRGLYS VNIPEVQKFY NSTGYGDELL WAASWLYHAT EEKTYLDYVT KHGNEFASFG 300 NPTWFSWDDK LAGTQVLLSR LLFFKKDLSG SKALASYRGT AKAVMCGLLP KSPTATGSRS 360 NSGLVLVSDW NPLQQSVSAA FLASLFSDYM LTSRIHKISC NGKIFKATEL RDFAKSQADY 420 ILGKNPMGMS FVVGYGDKYP EYIHHRGASI PADATTGCLD EFKYFNSTKP NPNIAYGALV 480 GGPYLNETFS DSRENVRQNE PTTYNNALLV GLLSSLVTTS SALQSLK* |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
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| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| PLN02171 | PLN02171 | 8.0e-137 | 49 | 506 | 469 | + endoglucanase | ||
| PLN00119 | PLN00119 | 6.0e-141 | 54 | 505 | 458 | + endoglucanase | ||
| PLN02340 | PLN02340 | 9.0e-146 | 60 | 502 | 453 | + endoglucanase | ||
| pfam00759 | Glyco_hydro_9 | 4.0e-158 | 60 | 506 | 451 | + Glycosyl hydrolase family 9. | ||
| PLN02345 | PLN02345 | 0 | 63 | 506 | 448 | + endoglucanase | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
| GO:0005975 | carbohydrate metabolic process |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | AAM63477.1 | 0 | 55 | 527 | 53 | 525 | endo-beta-1,4-glucanase, putative [Arabidopsis thaliana] |
| RefSeq | NP_173423.1 | 0 | 54 | 511 | 43 | 500 | AtGH9B5 (Arabidopsis thaliana Glycosyl Hydrolase 9B5); catalytic/ hydrolase, hydrolyzing O-glycosyl compounds |
| RefSeq | NP_177697.1 | 0 | 55 | 527 | 53 | 525 | AtGH9B7 (Arabidopsis thaliana glycosyl hydrolase 9B7); catalytic/ hydrolase, hydrolyzing O-glycosyl compounds |
| RefSeq | XP_002276739.1 | 0 | 36 | 526 | 33 | 524 | PREDICTED: hypothetical protein [Vitis vinifera] |
| RefSeq | XP_002510516.1 | 0 | 1 | 526 | 1 | 522 | endo-1,4-beta-glucanase, putative [Ricinus communis] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 1ksd_A | 0 | 60 | 517 | 5 | 429 | A Chain A, The Structure Of Ascorbate Peroxidase Compound Ii |
| PDB | 1ksc_A | 0 | 60 | 517 | 5 | 429 | A Chain A, The Structure Of Ascorbate Peroxidase Compound Ii |
| PDB | 1ks8_A | 0 | 60 | 517 | 5 | 429 | A Chain A, The Structure Of Endoglucanase From Termite, Nasutitermes Takasagoensis, At Ph 2.5. |
| PDB | 4tf4_B | 0 | 59 | 517 | 5 | 441 | A Chain A, The Structure Of Endoglucanase From Termite, Nasutitermes Takasagoensis, At Ph 2.5. |
| PDB | 4tf4_A | 0 | 59 | 517 | 5 | 441 | A Chain A, The Structure Of Endoglucanase From Termite, Nasutitermes Takasagoensis, At Ph 2.5. |
