| Basic Information | |
|---|---|
| Species | Brassica rapa |
| Cazyme ID | Bra021441 |
| Family | GH1 |
| Protein Properties | Length: 491 Molecular Weight: 55371.4 Isoelectric Point: 7.8807 |
| Chromosome | Chromosome/Scaffold: 01 Start: 25205245 End: 25208027 |
| Description | beta glucosidase 2 |
| View CDS | |
| External Links |
|---|
| NCBI Taxonomy |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
 | |||
| Family | Start | End | Evalue |
| GH1 | 27 | 471 | 0 |
| RDDFPHDFTFGSGTSAYQWEGAYDEDGKKPSVWDTYVHSRNMENGDKACDGYHKYKEDVQLMVETGLEAFRFSISWSRLIPNGRGSVNPKGLQFYKNFIL ELVSHGIEPHVTLYHYDHPQQLEDEYGGWLNRRIIKDFTAYADVCFREFGKHVKFWTTINEANIFTVGGYDGGNTPPGRCSTCLSGNSSTEPYIVAHNLL LAHASASRLYKQKYKNTQGGSVGFSIFAIGFRPSINSKDDEMAIQRFKDFFFGWMLGPLTYGDYPEGMKRIVGTRLPVFTKEESEKVKGSSDFVGVIHYL AASISNAQSQPSLPGDSAFFTDIGASLTFAPWAMEVVLEYIKQSYGNPPVYILENGKPMKQDLQLQKKDTPRIEFLDAYIGAVLKAVRNGSDTRGYFVWS FMDLYELLSGYKFSFGLYSVNFSDPHRNRSPKLSAHWYSAFLKGN | |||
| Full Sequence |
|---|
| Protein Sequence Length: 491 Download |
| MDRRKLYVLT IFVTLSVRCG CVANYTRDDF PHDFTFGSGT SAYQWEGAYD EDGKKPSVWD 60 TYVHSRNMEN GDKACDGYHK YKEDVQLMVE TGLEAFRFSI SWSRLIPNGR GSVNPKGLQF 120 YKNFILELVS HGIEPHVTLY HYDHPQQLED EYGGWLNRRI IKDFTAYADV CFREFGKHVK 180 FWTTINEANI FTVGGYDGGN TPPGRCSTCL SGNSSTEPYI VAHNLLLAHA SASRLYKQKY 240 KNTQGGSVGF SIFAIGFRPS INSKDDEMAI QRFKDFFFGW MLGPLTYGDY PEGMKRIVGT 300 RLPVFTKEES EKVKGSSDFV GVIHYLAASI SNAQSQPSLP GDSAFFTDIG ASLTFAPWAM 360 EVVLEYIKQS YGNPPVYILE NGKPMKQDLQ LQKKDTPRIE FLDAYIGAVL KAVRNGSDTR 420 GYFVWSFMDL YELLSGYKFS FGLYSVNFSD PHRNRSPKLS AHWYSAFLKG NTTFLGSQGI 480 TRSQSNLSSS * |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
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| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| TIGR03356 | BGL | 8.0e-124 | 31 | 464 | 442 | + beta-galactosidase. | ||
| pfam00232 | Glyco_hydro_1 | 3.0e-141 | 26 | 471 | 464 | + Glycosyl hydrolase family 1. | ||
| PLN02849 | PLN02849 | 0 | 6 | 490 | 498 | + beta-glucosidase | ||
| PLN02814 | PLN02814 | 0 | 4 | 490 | 504 | + beta-glucosidase | ||
| PLN02998 | PLN02998 | 0 | 25 | 470 | 465 | + beta-glucosidase | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
| GO:0005975 | carbohydrate metabolic process |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | AAD14488.1 | 0 | 6 | 490 | 5 | 527 | AAD14488 Similar to gi |
| EMBL | CAA18113.1 | 0 | 6 | 484 | 8 | 459 | glucosidase like protein [Arabidopsis thaliana] |
| RefSeq | NP_176217.2 | 0 | 6 | 490 | 5 | 511 | BGLU4 (BETA GLUCOSIDASE 4); catalytic/ cation binding / hydrolase, hydrolyzing O-glycosyl compounds [Arabidopsis thaliana] |
| RefSeq | NP_193941.2 | 0 | 6 | 484 | 8 | 498 | BGLU3 (BETA GLUCOSIDASE 2); catalytic/ cation binding / hydrolase, hydrolyzing O-glycosyl compounds [Arabidopsis thaliana] |
| RefSeq | NP_973974.1 | 0 | 25 | 490 | 29 | 486 | BGLU1 (BETA GLUCOSIDASE 1); catalytic/ cation binding / hydrolase, hydrolyzing O-glycosyl compounds [Arabidopsis thaliana] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 3gnr_A | 0 | 26 | 469 | 13 | 487 | A Chain A, Polygalacturonase From Erwinia Carotovora Ssp. Carotovora |
| PDB | 3gnp_A | 0 | 26 | 469 | 13 | 487 | A Chain A, Polygalacturonase From Erwinia Carotovora Ssp. Carotovora |
| PDB | 3gno_A | 0 | 26 | 469 | 13 | 487 | A Chain A, Crystal Structure Of A Rice Os3bglu6 Beta-glucosidase |
| PDB | 2rgm_B | 0 | 26 | 469 | 16 | 480 | A Chain A, Crystal Structure Of A Rice Os3bglu6 Beta-glucosidase |
| PDB | 2rgm_A | 0 | 26 | 469 | 16 | 480 | A Chain A, Crystal Structure Of A Rice Os3bglu6 Beta-glucosidase |
| Metabolic Pathways | |||
|---|---|---|---|
| Pathway Name | Reaction | EC | Protein Name |
| coumarin biosynthesis (via 2-coumarate) | RXN-8036 | EC-3.2.1.21 | β-glucosidase |
| linamarin degradation | RXN-5341 | EC-3.2.1.21 | β-glucosidase |
| linustatin bioactivation | RXN-13602 | EC-3.2.1.21 | β-glucosidase |
| linustatin bioactivation | RXN-5341 | EC-3.2.1.21 | β-glucosidase |
| lotaustralin degradation | RXN-9674 | EC-3.2.1.21 | β-glucosidase |
| neolinustatin bioactivation | RXN-13603 | EC-3.2.1.21 | β-glucosidase |
| neolinustatin bioactivation | RXN-9674 | EC-3.2.1.21 | β-glucosidase |
| taxiphyllin bioactivation | RXN-13600 | EC-3.2.1.21 | β-glucosidase |
