| Basic Information | |
|---|---|
| Species | Brachypodium distachyon |
| Cazyme ID | Bradi1g37160.1 |
| Family | CBM43 |
| Protein Properties | Length: 485 Molecular Weight: 52656.4 Isoelectric Point: 5.2812 |
| Chromosome | Chromosome/Scaffold: 1 Start: 32941665 End: 32943193 |
| Description | O-Glycosyl hydrolases family 17 protein |
| View CDS | |
| External Links |
|---|
| NCBI Taxonomy |
| Plaza |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
 | |||
| Family | Start | End | Evalue |
| CBM43 | 368 | 448 | 1.3e-22 |
| WCVLDDEAKAQDKLPGNIQYACAGGDCTALGYGCSCDGLDEKSNISYAFNMYFQMQDQDVRACDFDGLANITDKNASTKGC | |||
| GH17 | 30 | 345 | 0 |
| VGVNWGSQLTHPLLPSSVVKMLKDNGIMKVKLFDADPWPVEALLDSGIEVMLGIPNDMLEIMSSYGSAQDWVKENVTAYGDKLKLKYVAVGNEPFLKSYN GTFMKTTVPALKNIQKALDAAGLGDKVKATVPLNADVYVSPDDKPSSGQFRPDIDDVMTDMVKFLHDHGAPFVVNIYPFLSLYQSDDFPFEFAFFDGGRN IQDKDGVSYSNVFDANYDTLVSALKKAGVGGLKVVVGEVGWPTDGNKNANMKLARRFYDGLMKKLAKNEGTHLRPGKLDVYLFGLFDEDLKSIAPGNFER HWGILTYDGKPKFPMD | |||
| Full Sequence |
|---|
| Protein Sequence Length: 485 Download |
| MAPLLRLLAG AAALLVAVSH ASAWSSAVDV GVNWGSQLTH PLLPSSVVKM LKDNGIMKVK 60 LFDADPWPVE ALLDSGIEVM LGIPNDMLEI MSSYGSAQDW VKENVTAYGD KLKLKYVAVG 120 NEPFLKSYNG TFMKTTVPAL KNIQKALDAA GLGDKVKATV PLNADVYVSP DDKPSSGQFR 180 PDIDDVMTDM VKFLHDHGAP FVVNIYPFLS LYQSDDFPFE FAFFDGGRNI QDKDGVSYSN 240 VFDANYDTLV SALKKAGVGG LKVVVGEVGW PTDGNKNANM KLARRFYDGL MKKLAKNEGT 300 HLRPGKLDVY LFGLFDEDLK SIAPGNFERH WGILTYDGKP KFPMDLSGQG HDKLLAGVSG 360 VQYLPHQWCV LDDEAKAQDK LPGNIQYACA GGDCTALGYG CSCDGLDEKS NISYAFNMYF 420 QMQDQDVRAC DFDGLANITD KNASTKGCLF PVQIISAGGR MAPALRWTTL LALVAHVLVM 480 GFIV* |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
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| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| pfam07983 | X8 | 4.0e-15 | 367 | 436 | 77 | + X8 domain. The X8 domain domain contains at least 6 conserved cysteine residues that presumably form three disulphide bridges. The domain is found in an Olive pollen allergen as well as at the C-terminus of several families of glycosyl hydrolases. This domain may be involved in carbohydrate binding. This domain is characteristic of GPI-anchored domains. | ||
| smart00768 | X8 | 4.0e-27 | 367 | 450 | 86 | + Possibly involved in carbohydrate binding. The X8 domain, which may be involved in carbohydrate binding, is found in an Olive pollen antigen as well as at the C terminus of family 17 glycosyl hydrolases. It contains 6 conserved cysteine residues which presumably form three disulfide bridges. | ||
| pfam00332 | Glyco_hydro_17 | 5.0e-62 | 31 | 345 | 318 | + Glycosyl hydrolases family 17. | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
| GO:0005975 | carbohydrate metabolic process |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | ACR38156.1 | 0 | 28 | 456 | 36 | 465 | unknown [Zea mays] |
| GenBank | EAZ37505.1 | 0 | 26 | 453 | 29 | 456 | hypothetical protein OsJ_21839 [Oryza sativa Japonica Group] |
| RefSeq | NP_001057968.1 | 0 | 26 | 453 | 29 | 456 | Os06g0590600 [Oryza sativa (japonica cultivar-group)] |
| RefSeq | XP_002275701.1 | 0 | 4 | 461 | 1 | 461 | PREDICTED: hypothetical protein [Vitis vinifera] |
| RefSeq | XP_002438620.1 | 0 | 25 | 460 | 36 | 472 | hypothetical protein SORBIDRAFT_10g022940 [Sorghum bicolor] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 3ur8_B | 0 | 30 | 347 | 3 | 315 | A Chain A, Crystal Structure Of Medicago Truncatula Ugt71g1 |
| PDB | 3ur8_A | 0 | 30 | 347 | 3 | 315 | A Chain A, Crystal Structure Of Medicago Truncatula Ugt71g1 |
| PDB | 3ur7_B | 0 | 30 | 347 | 3 | 315 | A Chain A, Higher-density Crystal Structure Of Potato Endo-1,3-beta-glucanase |
| PDB | 3ur7_A | 0 | 30 | 347 | 3 | 315 | A Chain A, Higher-density Crystal Structure Of Potato Endo-1,3-beta-glucanase |
| PDB | 3f55_D | 0 | 29 | 347 | 1 | 316 | A Chain A, Higher-density Crystal Structure Of Potato Endo-1,3-beta-glucanase |
