| Basic Information | |
|---|---|
| Species | Brachypodium distachyon |
| Cazyme ID | Bradi1g46720.1 |
| Family | CE8 |
| Protein Properties | Length: 153 Molecular Weight: 16716.5 Isoelectric Point: 4.5729 |
| Chromosome | Chromosome/Scaffold: 1 Start: 45292676 End: 45293343 |
| Description | Plant invertase/pectin methylesterase inhibitor superfamily |
| View CDS | |
| External Links |
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| NCBI Taxonomy |
| Plaza |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
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| Family | Start | End | Evalue |
| CE8 | 32 | 140 | 2.9e-29 |
| SPDEDTVFAVHNCTVAASPDLGAGTQTFLGRPWGAHARTVVMESYLGPLVDRAGWVGWPGAEPARGDTVYFGEYWNGGPGAGTDGRVGWAGFDEMDYDEA AQFSVDSFI | |||
| Full Sequence |
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| Protein Sequence Length: 153 Download |
| MYSVLAQCKH LSHLRFWGHP RFQRRDSDII SSPDEDTVFA VHNCTVAASP DLGAGTQTFL 60 GRPWGAHART VVMESYLGPL VDRAGWVGWP GAEPARGDTV YFGEYWNGGP GAGTDGRVGW 120 AGFDEMDYDE AAQFSVDSFI LGDDWLRATS FP* |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
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| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| PLN02713 | PLN02713 | 2.0e-34 | 31 | 152 | 125 | + Probable pectinesterase/pectinesterase inhibitor | ||
| PLN02468 | PLN02468 | 2.0e-34 | 33 | 152 | 121 | + putative pectinesterase/pectinesterase inhibitor | ||
| pfam01095 | Pectinesterase | 8.0e-37 | 31 | 143 | 117 | + Pectinesterase. | ||
| PLN03043 | PLN03043 | 6.0e-38 | 33 | 152 | 123 | + Probable pectinesterase/pectinesterase inhibitor; Provisional | ||
| PLN02416 | PLN02416 | 9.0e-41 | 23 | 152 | 133 | + probable pectinesterase/pectinesterase inhibitor | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0005618 | cell wall |
| GO:0030599 | pectinesterase activity |
| GO:0042545 | cell wall modification |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | ABN08348.1 | 1e-32 | 4 | 152 | 382 | 529 | Pectinesterase; Pectinesterase inhibitor [Medicago truncatula] |
| DDBJ | BAH56489.1 | 5e-34 | 23 | 152 | 413 | 538 | pectin methylesterase 1 [Prunus persica] |
| RefSeq | NP_001057041.1 | 0 | 33 | 152 | 458 | 580 | Os06g0193200 [Oryza sativa (japonica cultivar-group)] |
| RefSeq | XP_002436630.1 | 0 | 3 | 152 | 452 | 601 | hypothetical protein SORBIDRAFT_10g006230 [Sorghum bicolor] |
| RefSeq | XP_002516192.1 | 3e-34 | 33 | 152 | 418 | 538 | Pectinesterase PPE8B precursor, putative [Ricinus communis] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 1xg2_A | 1e-24 | 31 | 149 | 187 | 307 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
| PDB | 1gq8_A | 7e-24 | 33 | 152 | 193 | 314 | A Chain A, Pectin Methylesterase From Carrot |
| Metabolic Pathways | |||
|---|---|---|---|
| Pathway Name | Reaction | EC | Protein Name |
| homogalacturonan degradation | RXN-2102 | EC-3.1.1.11 | pectinesterase |
| Hydropathy |
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| EST Download unfiltered results here | ||||
|---|---|---|---|---|
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| Hit | Length | Start | End | EValue |
| CK074962 | 123 | 33 | 152 | 0 |
| FE611665 | 121 | 33 | 152 | 0 |
| FE611664 | 121 | 33 | 152 | 0 |
| FL836826 | 121 | 33 | 152 | 0 |
| FL836825 | 121 | 33 | 152 | 0 |
| Orthologous Group | |||||
|---|---|---|---|---|---|
| Species | ID | ||||
| Panicum virgatum | Pavirv00030091m | ||||
| Sequence Alignments (This image is cropped. Click for full image.) |
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| Phylogeny |
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