Basic Information | |
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Species | Brachypodium distachyon |
Cazyme ID | Bradi1g60410.1 |
Family | CBM43 |
Protein Properties | Length: 488 Molecular Weight: 51745.6 Isoelectric Point: 6.6258 |
Chromosome | Chromosome/Scaffold: 1 Start: 59792584 End: 59794047 |
Description | O-Glycosyl hydrolases family 17 protein |
View CDS |
External Links |
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NCBI Taxonomy |
Plaza |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
CBM43 | 366 | 447 | 1.4e-21 |
WCVLRPDASAADPAVVSAVSYASQYADCTSLSPGSSCGGLDAKGNVSYAFNEFFQSAGQQKGSCAFNNLSVITTTDPSRGTC | |||
GH17 | 24 | 345 | 0 |
AANWGTRAHRPIPGDVTVRLLKDNGFDKVKLFEADPSALEALGHSGIQVMLGLPNELLASVAGDVNAAERWVLQNVSAYVSKHGVDIRYVAVGNEPFLKS YKGQFEAATLPAVRNVQAALVKAGLSRQVRVTVPLNADVYESLDGRPSSGDFRPDITGLMTSLVRFLLDNGGVLAINIYPFLSLDADANFPRDYAYFPAP GAPPSQASVQDGNVLYTNVFDANYDTLIAALEKHGLGNITVVVGEIGWPTDGDANANVASAQRFNQGLFDRIVAGKGTPRRPTMPDVYVFALLDEDAKSV DPGNFERHWGIFNYDGSPKYAL |
Full Sequence |
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Protein Sequence Length: 488 Download |
MAGGAVFRAL VLLCAATVSA EALAANWGTR AHRPIPGDVT VRLLKDNGFD KVKLFEADPS 60 ALEALGHSGI QVMLGLPNEL LASVAGDVNA AERWVLQNVS AYVSKHGVDI RYVAVGNEPF 120 LKSYKGQFEA ATLPAVRNVQ AALVKAGLSR QVRVTVPLNA DVYESLDGRP SSGDFRPDIT 180 GLMTSLVRFL LDNGGVLAIN IYPFLSLDAD ANFPRDYAYF PAPGAPPSQA SVQDGNVLYT 240 NVFDANYDTL IAALEKHGLG NITVVVGEIG WPTDGDANAN VASAQRFNQG LFDRIVAGKG 300 TPRRPTMPDV YVFALLDEDA KSVDPGNFER HWGIFNYDGS PKYALRLANG KGIVPARGVR 360 YLSKQWCVLR PDASAADPAV VSAVSYASQY ADCTSLSPGS SCGGLDAKGN VSYAFNEFFQ 420 SAGQQKGSCA FNNLSVITTT DPSRGTCRFK IMIDTGRHDL NHASAAARTA VAWSAVLVLA 480 LLALVAV* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam07983 | X8 | 2.0e-5 | 393 | 434 | 48 | + X8 domain. The X8 domain domain contains at least 6 conserved cysteine residues that presumably form three disulphide bridges. The domain is found in an Olive pollen allergen as well as at the C-terminus of several families of glycosyl hydrolases. This domain may be involved in carbohydrate binding. This domain is characteristic of GPI-anchored domains. | ||
COG5309 | COG5309 | 6.0e-7 | 51 | 338 | 301 | + Exo-beta-1,3-glucanase [Carbohydrate transport and metabolism] | ||
smart00768 | X8 | 8.0e-19 | 393 | 449 | 58 | + Possibly involved in carbohydrate binding. The X8 domain, which may be involved in carbohydrate binding, is found in an Olive pollen antigen as well as at the C terminus of family 17 glycosyl hydrolases. It contains 6 conserved cysteine residues which presumably form three disulfide bridges. | ||
pfam00332 | Glyco_hydro_17 | 1.0e-73 | 23 | 345 | 326 | + Glycosyl hydrolases family 17. |
Gene Ontology | |
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GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005975 | carbohydrate metabolic process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | AAP12947.1 | 0 | 20 | 465 | 26 | 471 | putative 1,3-beta-glucanase [Oryza sativa Japonica Group] |
GenBank | EAY90344.1 | 0 | 20 | 465 | 26 | 471 | hypothetical protein OsI_11921 [Oryza sativa Indica Group] |
RefSeq | NP_001147933.1 | 0 | 21 | 468 | 28 | 477 | glucan endo-1,3-beta-glucosidase 5 [Zea mays] |
RefSeq | XP_002467735.1 | 0 | 21 | 487 | 28 | 499 | hypothetical protein SORBIDRAFT_01g033200 [Sorghum bicolor] |
RefSeq | XP_002516181.1 | 0 | 3 | 485 | 17 | 498 | Glucan endo-1,3-beta-glucosidase precursor, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 2cyg_A | 0 | 34 | 347 | 13 | 312 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
PDB | 1ghr_A | 1.4013e-45 | 27 | 335 | 5 | 294 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
PDB | 1aq0_B | 1.4013e-45 | 27 | 335 | 5 | 294 | A Chain A, Barley 1,3-1,4-Beta-Glucanase In Monoclinic Space Group |
PDB | 1aq0_A | 1.4013e-45 | 27 | 335 | 5 | 294 | A Chain A, Barley 1,3-1,4-Beta-Glucanase In Monoclinic Space Group |
PDB | 1ghs_B | 9.99967e-42 | 34 | 347 | 13 | 306 | A Chain A, The Three-Dimensional Structures Of Two Plant Beta-Glucan Endohydrolases With Distinct Substrate Specificities |