| Basic Information | |
|---|---|
| Species | Capsella rubella |
| Cazyme ID | Carubv10025378m |
| Family | GH1 |
| Protein Properties | Length: 426 Molecular Weight: 49453.2 Isoelectric Point: 5.4365 |
| Chromosome | Chromosome/Scaffold: 4 Start: 13574851 End: 13578151 |
| Description | beta glucosidase 28 |
| View CDS | |
| External Links |
|---|
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
 | |||
| Family | Start | End | Evalue |
| GH1 | 148 | 303 | 1.6e-35 |
| QDGQIGIVVSPLWFEPYDSSSPADNEAVKRALVAELDWHLDPVIHGDYPELMKKRIGNRLPSFTREQSQMLKNSSDFIGINYYTARYIAHLPHVDHARPR FVTDQQLKWTVTNQSNHQFGPGEDRGILQSHPEGLRKVLNYIKDKYNNPIVYIKEN | |||
| GH1 | 33 | 146 | 1.4013e-45 |
| HDFPDNFVFGTAASAFQYEGATSEGGKSPTIWDYFSHTFPERTSMQNADVAVDFYHRYKDDIKLMKDLNMDAFRFSISWARLIPSIQPSITLYHWDHPQA LEDEYGGFLSPQIT | |||
| Full Sequence |
|---|
| Protein Sequence Length: 426 Download |
| MKVYIFIQLL IIISWLSKKV TSFPPESRAL DRHDFPDNFV FGTAASAFQY EGATSEGGKS 60 PTIWDYFSHT FPERTSMQNA DVAVDFYHRY KDDIKLMKDL NMDAFRFSIS WARLIPSIQP 120 SITLYHWDHP QALEDEYGGF LSPQITSQDG QIGIVVSPLW FEPYDSSSPA DNEAVKRALV 180 AELDWHLDPV IHGDYPELMK KRIGNRLPSF TREQSQMLKN SSDFIGINYY TARYIAHLPH 240 VDHARPRFVT DQQLKWTVTN QSNHQFGPGE DRGILQSHPE GLRKVLNYIK DKYNNPIVYI 300 KENDNFEWEH GYSTRFGLYY VDYEDNDLTR YPKGSVNWFK QFLHRPVVKN EETEEERVWD 360 VVSREERYNK TFDDSEGFEA SVGSILYLMT NVSRREEGDE RDRCALGNPS HQLGFMLGTY 420 NSLGL* |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
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| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| TIGR03356 | BGL | 3.0e-28 | 149 | 339 | 244 | + beta-galactosidase. | ||
| pfam00232 | Glyco_hydro_1 | 2.0e-40 | 35 | 146 | 137 | + Glycosyl hydrolase family 1. | ||
| COG2723 | BglB | 2.0e-40 | 35 | 142 | 135 | + Beta-glucosidase/6-phospho-beta-glucosidase/beta-galactosidase [Carbohydrate transport and metabolism] | ||
| TIGR03356 | BGL | 9.0e-41 | 36 | 145 | 135 | + beta-galactosidase. | ||
| pfam00232 | Glyco_hydro_1 | 1.0e-42 | 147 | 342 | 252 | + Glycosyl hydrolase family 1. | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
| GO:0005975 | carbohydrate metabolic process |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | AAC16092.1 | 0 | 1 | 146 | 1 | 171 | putative beta-glucosidase [Arabidopsis thaliana] |
| GenBank | AAC16092.1 | 0 | 147 | 425 | 257 | 572 | putative beta-glucosidase [Arabidopsis thaliana] |
| RefSeq | NP_001118524.1 | 0 | 117 | 425 | 230 | 590 | BGLU29 (BETA GLUCOSIDASE 29); catalytic/ cation binding / hydrolase, hydrolyzing O-glycosyl compounds [Arabidopsis thaliana] |
| RefSeq | NP_850416.1 | 0 | 1 | 146 | 1 | 171 | BGLU28 (BETA GLUCOSIDASE 28); catalytic/ cation binding / hydrolase, hydrolyzing O-glycosyl compounds [Arabidopsis thaliana] |
| RefSeq | NP_850416.1 | 0 | 147 | 425 | 257 | 577 | BGLU28 (BETA GLUCOSIDASE 28); catalytic/ cation binding / hydrolase, hydrolyzing O-glycosyl compounds [Arabidopsis thaliana] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 4a3y_B | 4.99983e-42 | 147 | 358 | 264 | 533 | A Chain A, Crystal Structure Of Raucaffricine Glucosidase From Ajmaline Biosynthesis Pathway |
| PDB | 4a3y_B | 1e-35 | 26 | 146 | 13 | 160 | A Chain A, Crystal Structure Of Raucaffricine Glucosidase From Ajmaline Biosynthesis Pathway |
| PDB | 4a3y_A | 4.99983e-42 | 147 | 358 | 264 | 533 | A Chain A, Crystal Structure Of Raucaffricine Glucosidase From Ajmaline Biosynthesis Pathway |
| PDB | 4a3y_A | 1e-35 | 26 | 146 | 13 | 160 | A Chain A, Crystal Structure Of Raucaffricine Glucosidase From Ajmaline Biosynthesis Pathway |
| PDB | 3ptq_B | 4.99983e-42 | 148 | 343 | 260 | 503 | A Chain A, Crystal Structure Of Raucaffricine Glucosidase From Ajmaline Biosynthesis Pathway |
