| Basic Information | |
|---|---|
| Species | Citrus clementina |
| Cazyme ID | Ciclev10001025m |
| Family | GT33 |
| Protein Properties | Length: 475 Molecular Weight: 53327.8 Isoelectric Point: 6.7845 |
| Chromosome | Chromosome/Scaffold: 5 Start: 30736531 End: 30740889 |
| Description | UDP-Glycosyltransferase superfamily protein |
| View CDS | |
| External Links |
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| CAZyDB |
| Signature Domain Download full data set without filtering | |||
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| Family | Start | End | Evalue |
| GT33 | 6 | 463 | 0 |
| RACVVVLGDLGRSPRMQYQALSLARQMSLEVDVVAYGGSKPHAAILEHPSIHIHTMTQWPTIPRGLPKVLKPVLLLLKPLIQFFMLLWFLCVKIASPDVF LVQNPPSVPTLVAVKWASSLRRSAFIVDWHNFGYTLLSLSLGRRSHFVSIYRWIEKYYGKMANGSLCVTQAMQHELAQNWGIKATVLYDQPPEFFHPTSL EEKHELFCRLNKNLHQPLGVQDCVSNAGMEGQKADETIFTSLAGTDVFLKPNRPAVVVSSTSWTPDEDFGILLEAALMYDRRVAAILNEDDSTNEEVFLK EISDGKQYLYPRLLFIITGKGPDKESYEEKIRRLRLKRVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVSYSCIEELVK VDKNGLLFSSSSELADQLLMLFKGFPDDSDVLKKLRNGTLEMGLSARWATEWEEHAKP | |||
| Full Sequence |
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| Protein Sequence Length: 475 Download |
| MGRRGRACVV VLGDLGRSPR MQYQALSLAR QMSLEVDVVA YGGSKPHAAI LEHPSIHIHT 60 MTQWPTIPRG LPKVLKPVLL LLKPLIQFFM LLWFLCVKIA SPDVFLVQNP PSVPTLVAVK 120 WASSLRRSAF IVDWHNFGYT LLSLSLGRRS HFVSIYRWIE KYYGKMANGS LCVTQAMQHE 180 LAQNWGIKAT VLYDQPPEFF HPTSLEEKHE LFCRLNKNLH QPLGVQDCVS NAGMEGQKAD 240 ETIFTSLAGT DVFLKPNRPA VVVSSTSWTP DEDFGILLEA ALMYDRRVAA ILNEDDSTNE 300 EVFLKEISDG KQYLYPRLLF IITGKGPDKE SYEEKIRRLR LKRVAFRTMW LSAEDYPLLL 360 GSADLGVCLH TSSSGLDLPM KVVDMFGCGL PVCAVSYSCI EELVKVDKNG LLFSSSSELA 420 DQLLMLFKGF PDDSDVLKKL RNGTLEMGLS ARWATEWEEH AKPLITEVIS QFDD* 480 |
| Functional Domains Download unfiltered results here | ||||||||
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| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| TIGR00032 | argG | 3.0e-10 | 313 | 455 | 145 | + argininosuccinate synthase. argG in bacteria, ARG1 in Saccharomyces cerevisiae. There is a very unusual clustering in the alignment, with a deep split between one cohort of E. coli, H. influenzae, and Streptomyces, and the other cohort of eukaryotes, archaea, and the rest of the eubacteria [Amino acid biosynthesis, Glutamate family]. | ||
| pfam13692 | Glyco_trans_1_4 | 3.0e-10 | 301 | 428 | 128 | + Glycosyl transferases group 1. | ||
| cd03794 | GT1_wbuB_like | 1.0e-11 | 89 | 443 | 365 | + This family is most closely related to the GT1 family of glycosyltransferases. wbuB in E. coli is involved in the biosynthesis of the O26 O-antigen. It has been proposed to function as an N-acetyl-L-fucosamine (L-FucNAc) transferase. | ||
| PLN02275 | PLN02275 | 0 | 1 | 427 | 427 | + transferase, transferring glycosyl groups | ||
| cd03816 | GT1_ALG1_like | 0 | 4 | 465 | 464 | + This family is most closely related to the GT1 family of glycosyltransferases. The yeast gene ALG1 has been shown to function as a mannosyltransferase that catalyzes the formation of dolichol pyrophosphate (Dol-PP)-GlcNAc2Man from GDP-Man and Dol-PP-Glc-NAc2, and participates in the formation of the lipid-linked precursor oligosaccharide for N-glycosylation. In humans ALG1 has been associated with the congenital disorders of glycosylation (CDG) designated as subtype CDG-Ik. | ||
| Gene Ontology | |
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| GO Term | Description |
| GO:0009058 | biosynthetic process |
| Annotations - NR Download unfiltered results here | |||||||
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| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| EMBL | CBI19390.1 | 0 | 1 | 471 | 9 | 481 | unnamed protein product [Vitis vinifera] |
| RefSeq | NP_173105.1 | 0 | 1 | 474 | 1 | 464 | glycosyl transferase family 1 protein [Arabidopsis thaliana] |
| RefSeq | XP_002283369.1 | 0 | 1 | 470 | 124 | 595 | PREDICTED: hypothetical protein [Vitis vinifera] |
| RefSeq | XP_002330745.1 | 0 | 1 | 467 | 1 | 467 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002532170.1 | 0 | 4 | 471 | 8 | 473 | beta1,4 mannosyltransferase, putative [Ricinus communis] |
| Hydropathy |
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| EST Download unfiltered results here | ||||
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| Hit | Length | Start | End | EValue |
| DY292670 | 274 | 1 | 274 | 0 |
| DY278871 | 333 | 1 | 330 | 0 |
| DY302955 | 260 | 1 | 260 | 0 |
| DY300786 | 333 | 1 | 329 | 0 |
| DY278871 | 85 | 252 | 332 | 0.00008 |
| Sequence Alignments (This image is cropped. Click for full image.) |
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