Basic Information | |
---|---|
Species | Citrus clementina |
Cazyme ID | Ciclev10010343m |
Family | GT4 |
Protein Properties | Length: 781 Molecular Weight: 89150.3 Isoelectric Point: 6.0676 |
Chromosome | Chromosome/Scaffold: 1 Start: 24769195 End: 24772566 |
Description | sucrose synthase 4 |
View CDS |
External Links |
---|
CAZyDB |
Signature Domain Download full data set without filtering | |||
---|---|---|---|
Family | Start | End | Evalue |
GT4 | 540 | 705 | 0 |
KDSSKPILFTMARLDRVKNLTGLVEWYGKNAKLRELVNLVVVGGDRRKESKDLEEQAEMKKMYGLIDTYKLNGQFRWISSQMNRVRNGELYRYICDTKGA FVQPALYEAFGLTVVEAMTCGLPTFATCNGGPAEIIVHGKSGFHIDPYKGDQATGILVDFFEKCKV |
Full Sequence |
---|
Protein Sequence Length: 781 Download |
MFRFPPYFVF VCYSIERLGC GIYKRQQILS LVDAESNGAA IADVLNATQE AAVSSPWVAL 60 ALRTSPGVWC YIRVNVQTVD VEEISVSKYL LFKEEIVDGR KSNGNFAFEV DFEPFRALPH 120 PTLSNSIGHG MEFLNRHMSA KLFNDKESVQ SLLEFLRVHS HMGKNMMLNE KIQDLGTLQS 180 SLRMAEKYLS MLAPDTSYAE FEQKFQEIGL ERGWGDNAEH VLGMIQLLLD LLQAPESSTL 240 ETFLGKIPRV FNVVIFTPHG YFAQDNVLGY PDTGGQVVYI LDQVRALENE MLLRIKQQGL 300 DITPRILIIT RLLPDAVGTT CGQRVEKVYG TKYSDILRVP FRTEEGIVRK WISRFEVWPY 360 LETFTEDVAT EIIQELQCKP DLIIGNYSDG NIVASLLAHK LDVTQCTIAH ALELTKYPDS 420 DINWKKLDDK YHFSCQFTAD LFAMNRTDFI ITSTFQEIAG SKDTVGQYES HTAFSLPGLY 480 RVVNGIDAFD PKFNIVSPGA DMTIYFPYME EKRRLKHFHS EIEELLYSPV ENKEHLCVLK 540 DSSKPILFTM ARLDRVKNLT GLVEWYGKNA KLRELVNLVV VGGDRRKESK DLEEQAEMKK 600 MYGLIDTYKL NGQFRWISSQ MNRVRNGELY RYICDTKGAF VQPALYEAFG LTVVEAMTCG 660 LPTFATCNGG PAEIIVHGKS GFHIDPYKGD QATGILVDFF EKCKVDPGHW DEISQGGLKR 720 IQEKYTWKIY SERLLNLSGV YGFWKHLSKL DCREKNRYLE MFYSLMYRKQ VQTVPLAVDE 780 * |
Functional Domains Download unfiltered results here | ||||||||
---|---|---|---|---|---|---|---|---|
Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
TIGR02472 | sucr_P_syn_N | 2.0e-61 | 253 | 735 | 491 | + sucrose-phosphate synthase, putative, glycosyltransferase domain. This family consists of the N-terminal regions, or in some cases the entirety, of bacterial proteins closely related to plant sucrose-phosphate synthases (SPS). The C-terminal domain (TIGR02471), found with most members of this family, resembles both bona fide plant sucrose-phosphate phosphatases (SPP) and the SPP-like domain of plant SPS. At least two members of this family lack the SPP-like domain, which may have binding or regulatory rather than enzymatic activity by analogy to plant SPS. This enzyme produces sucrose 6-phosphate and UDP from UDP-glucose and D-fructose 6-phosphate, and may be encoded near the gene for fructokinase. | ||
cd03800 | GT1_Sucrose_synthase | 4.0e-120 | 252 | 735 | 485 | + This family is most closely related to the GT1 family of glycosyltransferases. The sucrose-phosphate synthases in this family may be unique to plants and photosynthetic bacteria. This enzyme catalyzes the synthesis of sucrose 6-phosphate from fructose 6-phosphate and uridine 5'-diphosphate-glucose, a key regulatory step of sucrose metabolism. The activity of this enzyme is regulated by phosphorylation and moderated by the concentration of various metabolites and light. | ||
PLN00142 | PLN00142 | 0 | 19 | 780 | 773 | + sucrose synthase | ||
TIGR02470 | sucr_synth | 0 | 19 | 777 | 771 | + sucrose synthase. This model represents sucrose synthase, an enzyme that, despite its name, generally uses rather produces sucrose. Sucrose plus UDP (or ADP) becomes D-fructose plus UDP-glucose (or ADP-glucose), which is then available for cell wall (or starch) biosynthesis. The enzyme is homologous to sucrose phosphate synthase, which catalyzes the penultimate step in sucrose synthesis. Sucrose synthase is found, so far, exclusively in plants and cyanobacteria [Energy metabolism, Biosynthesis and degradation of polysaccharides]. | ||
pfam00862 | Sucrose_synth | 0 | 15 | 528 | 524 | + Sucrose synthase. Sucrose synthases catalyze the synthesis of sucrose from UDP-glucose and fructose. This family includes the bulk of the sucrose synthase protein. However the carboxyl terminal region of the sucrose synthases belongs to the glycosyl transferase family pfam00534. |
Gene Ontology | |
---|---|
GO Term | Description |
GO:0005985 | sucrose metabolic process |
GO:0009058 | biosynthetic process |
Annotations - NR Download unfiltered results here | |||||||
---|---|---|---|---|---|---|---|
Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | AAD28641.1 | 0 | 15 | 777 | 34 | 804 | sucrose synthase [Gossypium hirsutum] |
GenBank | ACV72640.1 | 0 | 15 | 777 | 34 | 803 | sucrose synthase 1 [Gossypium hirsutum] |
DDBJ | BAA88905.1 | 0 | 15 | 779 | 34 | 805 | sucrose synthase [Citrus unshiu] |
DDBJ | BAA89049.1 | 0 | 15 | 779 | 34 | 805 | sucrose synthase [Citrus unshiu] |
RefSeq | XP_002326309.1 | 0 | 15 | 779 | 32 | 803 | hypothetical protein POPTRDRAFT_826368 [Populus trichocarpa] |
Annotations - PDB Download unfiltered results here | |||||||
---|---|---|---|---|---|---|---|
Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 3s29_H | 0 | 15 | 780 | 36 | 808 | A Chain A, Crystal Structure Of Lipl32, The Most Abundant Surface Protein Of Pathogenic Leptospira Spp |
PDB | 3s29_G | 0 | 15 | 780 | 36 | 808 | A Chain A, Crystal Structure Of Lipl32, The Most Abundant Surface Protein Of Pathogenic Leptospira Spp |
PDB | 3s29_F | 0 | 15 | 780 | 36 | 808 | A Chain A, Crystal Structure Of Lipl32, The Most Abundant Surface Protein Of Pathogenic Leptospira Spp |
PDB | 3s29_E | 0 | 15 | 780 | 36 | 808 | A Chain A, Crystal Structure Of Lipl32, The Most Abundant Surface Protein Of Pathogenic Leptospira Spp |
PDB | 3s29_D | 0 | 15 | 780 | 36 | 808 | A Chain A, Crystal Structure Of Lipl32, The Most Abundant Surface Protein Of Pathogenic Leptospira Spp |
EST Download unfiltered results here | ||||
---|---|---|---|---|
Hit | Length | Start | End | EValue |
HO794519 | 773 | 15 | 779 | 0 |
BU103683 | 784 | 5 | 779 | 0 |
CX109054 | 599 | 75 | 672 | 0 |
FG227316 | 453 | 250 | 702 | 0 |
GW837855 | 412 | 316 | 727 | 0 |
Sequence Alignments (This image is cropped. Click for full image.) |
---|