| Basic Information | |
|---|---|
| Species | Chlamydomonas reinhardtii |
| Cazyme ID | Cre12.g509200.t1.2 |
| Family | GH16 |
| Protein Properties | Length: 535 Molecular Weight: 59407.3 Isoelectric Point: 7.216 |
| Chromosome | Chromosome/Scaffold: 12 Start: 2104406 End: 2109067 |
| Description | |
| View CDS | |
| External Links |
|---|
| NCBI Taxonomy |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
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| Family | Start | End | Evalue |
| GH16 | 7 | 358 | 2.4e-30 |
| DEFNSKWRDFGPGKDAKWQALDLMYVNDDKAMFRKEAVTIKNGRAVLTASRTTSQGPYSAPWGDQLAEAEYTSGMLQGWNKFCFTGGYMEARLKLPGDDV HGGFWPAIFTLGNLGRAGYLRSTDGMWPFSYDTCDRNAVAQQPWSDHVGQRINACNSTKGRGAPEIDLLEVGVWQSKNPQLSTSLAIAPVLPVGLHWLDV EGGVYFPTYSDPTLYSSPNGWVGVNSYMTNKTLANGTIAEVFMPRPGTRVADSMSATHALNASHFTDFYVYGFDWKPKEYIRWYINGKLIYEINQKALRA ASNLANQSVGERLIPVDPQYININLAMSNSFAAISPDIPLPSSMEVDYIRVY | |||
| Full Sequence |
|---|
| Protein Sequence Length: 535 Download |
| MILVFSDEFN SKWRDFGPGK DAKWQALDLM YVNDDKAMFR KEAVTIKNGR AVLTASRTTS 60 QGPYSAPWGD QLAEAEYTSG MLQGWNKFCF TGGYMEARLK LPGDDVHGGF WPAIFTLGNL 120 GRAGYLRSTD GMWPFSYDTC DRNAVAQQPW SDHVGQRINA CNSTKGRGAP EIDLLEVGVW 180 QSKNPQLSTS LAIAPVLPVG LHWLDVEGGV YFPTYSDPTL YSSPNGWVGV NSYMTNKTLA 240 NGTIAEVFMP RPGTRVADSM SATHALNASH FTDFYVYGFD WKPKEYIRWY INGKLIYEIN 300 QKALRAASNL ANQSVGERLI PVDPQYININ LAMSNSFAAI SPDIPLPSSM EVDYIRVYQS 360 RDSINVGCDT PEFPSQDYIN KNVQRFKVNL PGWEDYVGDS RVMGPTMEPQ EEPVDYTPVI 420 VGLVVSFTCA FLIAGGVGYW LWRRKKQREA VAAAEAEAAK SGFKPEPAKT LPDQPQQKHW 480 IIRFTTGLWV GAGANTRAKV TQPKRLSGAS DQEMQVHVHP QQPRGPAKVV PMLV* 540 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
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| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| cd08023 | GH16_laminarinase_like | 5.0e-14 | 272 | 358 | 89 | + Laminarinase, member of the glycosyl hydrolase family 16. Laminarinase, also known as glucan endo-1,3-beta-D-glucosidase, is a glycosyl hydrolase family 16 member that hydrolyzes 1,3-beta-D-glucosidic linkages in 1,3-beta-D-glucans such as laminarins, curdlans, paramylons, and pachymans, with very limited action on mixed-link (1,3-1,4-)-beta-D-glucans. | ||
| cd08023 | GH16_laminarinase_like | 4.0e-14 | 5 | 136 | 140 | + Laminarinase, member of the glycosyl hydrolase family 16. Laminarinase, also known as glucan endo-1,3-beta-D-glucosidase, is a glycosyl hydrolase family 16 member that hydrolyzes 1,3-beta-D-glucosidic linkages in 1,3-beta-D-glucans such as laminarins, curdlans, paramylons, and pachymans, with very limited action on mixed-link (1,3-1,4-)-beta-D-glucans. | ||
| COG2273 | SKN1 | 2.0e-20 | 3 | 369 | 383 | + Beta-glucanase/Beta-glucan synthetase [Carbohydrate transport and metabolism] | ||
| cd02180 | GH16_fungal_KRE6_glucanase | 5.0e-71 | 3 | 359 | 370 | + Saccharomyces cerevisiae KRE6 and related glucanses, member of glycosyl hydrolase family 16. KRE6 is a Saccharomyces cerevisiae glucanase that participates in the synthesis of beta-1,6-glucan, a major structural component of the cell wall. It is a golgi membrane protein required for normal beta-1,6-glucan levels in the cell wall. KRE6 is closely realted to laminarinase, a glycosyl hydrolase family 16 member that hydrolyzes 1,3-beta-D-glucosidic linkages in 1,3-beta-D-glucans such as laminarins, curdlans, paramylons, and pachymans, with very limited action on mixed-link (1,3-1,4-)-beta-D-glucans. | ||
| pfam03935 | SKN1 | 3.0e-91 | 3 | 395 | 423 | + Beta-glucan synthesis-associated protein (SKN1). This family consists of the beta-glucan synthesis-associated proteins KRE6 and SKN1. Beta1,6-Glucan is a key component of the yeast cell wall, interconnecting cell wall proteins, beta1,3-glucan, and chitin. It has been postulated that the synthesis of beta1,6-glucan begins in the endoplasmic reticulum with the formation of protein-bound primer structures and that these primer structures are extended in the Golgi complex by two putative glucosyltransferases that are functionally redundant, Kre6 and Skn1. This is followed by maturation steps at the cell surface and by coupling to other cell wall macromolecules. | ||
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| RefSeq | XP_001691036.1 | 0 | 234 | 534 | 1 | 301 | predicted protein [Chlamydomonas reinhardtii] |
| RefSeq | XP_001691037.1 | 0 | 1 | 199 | 1 | 199 | predicted protein [Chlamydomonas reinhardtii] |
| RefSeq | XP_001829066.1 | 0 | 1 | 395 | 45 | 439 | hypothetical protein CC1G_01746 [Coprinopsis cinerea okayama7#130] |
| RefSeq | XP_001834130.1 | 0 | 1 | 394 | 28 | 425 | hypothetical protein CC1G_08761 [Coprinopsis cinerea okayama7#130] |
| RefSeq | XP_716603.1 | 0 | 3 | 395 | 217 | 584 | potential cell wall beta-glucan synthase [Candida albicans SC5314] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 2vy0_B | 0.000001 | 252 | 359 | 158 | 260 | A Chain A, The X-Ray Structure Of Endo-Beta-1,3-Glucanase From Pyrococcus Furiosus |
| PDB | 2vy0_A | 0.000001 | 252 | 359 | 158 | 260 | A Chain A, The X-Ray Structure Of Endo-Beta-1,3-Glucanase From Pyrococcus Furiosus |
| PDB | 3iln_B | 0.00002 | 272 | 359 | 165 | 248 | A Chain A, X-Ray Structure Of The Laminarinase From Rhodothermus Marinus |
| PDB | 3iln_A | 0.00002 | 272 | 359 | 165 | 248 | A Chain A, X-Ray Structure Of The Laminarinase From Rhodothermus Marinus |
