Basic Information | |
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Species | Eucalyptus grandis |
Cazyme ID | Eucgr.A02084.1 |
Family | CBM43 |
Protein Properties | Length: 479 Molecular Weight: 51829.7 Isoelectric Point: 4.7654 |
Chromosome | Chromosome/Scaffold: 1 Start: 31621811 End: 31625711 |
Description | O-Glycosyl hydrolases family 17 protein |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
CBM43 | 366 | 447 | 2.5e-26 |
WCVLNPKANDLSKLGTNINYACTFADCTSLGYGSSCNSLDANGNASYAFNMYYQVQNQNPLSCNFEGLATVTTQNISQGTCN | |||
GH17 | 25 | 343 | 0 |
LGVNWGTMATHELPPGTVVQMLKDNGIKKVKLFDADQYTLSALAGSNIEVMVAIPNDQLASMTSYERAKQWVQRNVTRYNFNGGVSIKYVAVGNEPFLSA YNGSFLNVTFPALQNIQNALNEVGVGDTVKATVPVNADVYNSPVSNPVPSAGRFRTDISDLMTQIVEFLAKNSAPLTVNIYPFLSLYGNDNFPIDYAFFD GATPVVDNGIQYTNVFDANFDTLVSALKAVGHGDMTLMVGEVGWPTDGDKNANIASAVRFYNGLMPRLAANTGTPLRPGYIEVYLFGLIDEDAKSIAPGS FERHWGIFRYDGQPKFPLD |
Full Sequence |
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Protein Sequence Length: 479 Download |
MNFSKWVLCL GLLGCSVFVA HVEGLGVNWG TMATHELPPG TVVQMLKDNG IKKVKLFDAD 60 QYTLSALAGS NIEVMVAIPN DQLASMTSYE RAKQWVQRNV TRYNFNGGVS IKYVAVGNEP 120 FLSAYNGSFL NVTFPALQNI QNALNEVGVG DTVKATVPVN ADVYNSPVSN PVPSAGRFRT 180 DISDLMTQIV EFLAKNSAPL TVNIYPFLSL YGNDNFPIDY AFFDGATPVV DNGIQYTNVF 240 DANFDTLVSA LKAVGHGDMT LMVGEVGWPT DGDKNANIAS AVRFYNGLMP RLAANTGTPL 300 RPGYIEVYLF GLIDEDAKSI APGSFERHWG IFRYDGQPKF PLDLSGQNQN KFLVAAKNVN 360 YLPQQWCVLN PKANDLSKLG TNINYACTFA DCTSLGYGSS CNSLDANGNA SYAFNMYYQV 420 QNQNPLSCNF EGLATVTTQN ISQGTCNFII QIAASPSSSL GPSLVALVLS AVFAFLFQ* 480 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
COG5309 | COG5309 | 6.0e-5 | 251 | 335 | 92 | + Exo-beta-1,3-glucanase [Carbohydrate transport and metabolism] | ||
pfam07983 | X8 | 7.0e-19 | 365 | 435 | 81 | + X8 domain. The X8 domain domain contains at least 6 conserved cysteine residues that presumably form three disulphide bridges. The domain is found in an Olive pollen allergen as well as at the C-terminus of several families of glycosyl hydrolases. This domain may be involved in carbohydrate binding. This domain is characteristic of GPI-anchored domains. | ||
smart00768 | X8 | 4.0e-32 | 365 | 448 | 86 | + Possibly involved in carbohydrate binding. The X8 domain, which may be involved in carbohydrate binding, is found in an Olive pollen antigen as well as at the C terminus of family 17 glycosyl hydrolases. It contains 6 conserved cysteine residues which presumably form three disulfide bridges. | ||
pfam00332 | Glyco_hydro_17 | 5.0e-78 | 25 | 343 | 322 | + Glycosyl hydrolases family 17. |
Gene Ontology | |
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GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005975 | carbohydrate metabolic process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | AAQ90287.1 | 0 | 14 | 477 | 17 | 479 | beta-1,3-glucanase, acidic [Coffea arabica] |
RefSeq | NP_179534.1 | 0 | 1 | 459 | 1 | 455 | glycosyl hydrolase family 17 protein [Arabidopsis thaliana] |
RefSeq | XP_002277003.1 | 0 | 3 | 452 | 7 | 453 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002319699.1 | 0 | 22 | 477 | 20 | 477 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002525445.1 | 0 | 22 | 468 | 20 | 469 | Glucan endo-1,3-beta-glucosidase precursor, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 3f55_D | 0 | 25 | 345 | 2 | 316 | A Chain A, Amino Terminal 9kda Domain Of Vaccinia Virus Dna Topoisomerase I Residues 1-77, Experimental Electron Density For Residues 1-77 |
PDB | 3f55_C | 0 | 25 | 345 | 2 | 316 | A Chain A, Amino Terminal 9kda Domain Of Vaccinia Virus Dna Topoisomerase I Residues 1-77, Experimental Electron Density For Residues 1-77 |
PDB | 3f55_B | 0 | 25 | 345 | 2 | 316 | A Chain A, Amino Terminal 9kda Domain Of Vaccinia Virus Dna Topoisomerase I Residues 1-77, Experimental Electron Density For Residues 1-77 |
PDB | 3f55_A | 0 | 25 | 345 | 2 | 316 | A Chain A, Amino Terminal 9kda Domain Of Vaccinia Virus Dna Topoisomerase I Residues 1-77, Experimental Electron Density For Residues 1-77 |
PDB | 3em5_D | 0 | 25 | 345 | 2 | 316 | A Chain A, Crystal Structure Of A Native Endo Beta-1,3-Glucanase (Hev B 2), A Major Allergen From Hevea Brasiliensis |