| Basic Information | |
|---|---|
| Species | Eucalyptus grandis |
| Cazyme ID | Eucgr.D01896.1 |
| Family | CBM49 |
| Protein Properties | Length: 166 Molecular Weight: 18389.6 Isoelectric Point: 7.0851 |
| Chromosome | Chromosome/Scaffold: 4 Start: 32925534 End: 32926610 |
| Description | glycosyl hydrolase 9C2 |
| View CDS | |
| External Links |
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| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
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| Family | Start | End | Evalue |
| CBM49 | 75 | 150 | 1.1e-31 |
| TEQKPTVSWTANGRTYHRYLTVVTDKLDKTLKYVNLLISKLYGPLWAVTKSGDLYVFPSWIQSLPSGKSLEFVYIH | |||
| Full Sequence |
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| Protein Sequence Length: 166 Download |
| MNVEHMQVDY TMGDNPRATS YVVSGPNAYD NFADQRDNYK QMEPATHNNA PFPGILVRLS 60 GGHGGYVTAS NELSTEQKPT VSWTANGRTY HRYLTVVTDK LDKTLKYVNL LISKLYGPLW 120 AVTKSGDLYV FPSWIQSLPS GKSLEFVYIH ASPQADISIS SYTMA* |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
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| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| pfam00759 | Glyco_hydro_9 | 3.0e-10 | 7 | 57 | 89 | + Glycosyl hydrolase family 9. | ||
| smart01063 | CBM49 | 4.0e-11 | 76 | 152 | 81 | + Carbohydrate binding domain CBM49. This domain is found at the C terminal of cellulases and in vitro binding studies have shown it to binds to crystalline cellulose. | ||
| pfam09478 | CBM49 | 4.0e-24 | 73 | 151 | 80 | + Carbohydrate binding domain CBM49. This domain is found at the C terminal of cellulases and in vitro binding studies have shown it to binds to crystalline cellulose. | ||
| PLN02340 | PLN02340 | 3.0e-27 | 22 | 162 | 158 | + endoglucanase | ||
| PLN02171 | PLN02171 | 2.0e-62 | 7 | 165 | 241 | + endoglucanase | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
| GO:0005576 | extracellular region |
| GO:0005975 | carbohydrate metabolic process |
| GO:0030246 | carbohydrate binding |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | ABK96199.1 | 0 | 1 | 164 | 38 | 279 | unknown [Populus trichocarpa] |
| DDBJ | BAA21111.1 | 0 | 1 | 165 | 78 | 324 | endo-1,4-beta-glucanase [Gossypium hirsutum] |
| EMBL | CAI68020.1 | 0 | 1 | 165 | 380 | 620 | endo-beta-1,4-glucanase [Prunus persica] |
| RefSeq | XP_002270880.1 | 0 | 7 | 165 | 389 | 629 | PREDICTED: hypothetical protein [Vitis vinifera] |
| RefSeq | XP_002299478.1 | 0 | 7 | 165 | 386 | 622 | predicted protein [Populus trichocarpa] |
| Hydropathy |
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| EST Download unfiltered results here | ||||
|---|---|---|---|---|
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| Hit | Length | Start | End | EValue |
| ES593378 | 169 | 19 | 166 | 0 |
| ES593079 | 148 | 41 | 166 | 0 |
| FG454813 | 171 | 23 | 166 | 0 |
| GW877716 | 174 | 19 | 166 | 0 |
| CX017585 | 242 | 7 | 166 | 0 |
| Sequence Alignments (This image is cropped. Click for full image.) |
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