Basic Information | |
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Species | Eucalyptus grandis |
Cazyme ID | Eucgr.J01882.1 |
Family | CBM43 |
Protein Properties | Length: 495 Molecular Weight: 54263.8 Isoelectric Point: 7.8586 |
Chromosome | Chromosome/Scaffold: 10 Start: 24888465 End: 24891838 |
Description | O-Glycosyl hydrolases family 17 protein |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
CBM43 | 378 | 457 | 1.1e-24 |
WCVVNNNENLSNATASFLDACSVADCTAVAPGGSCYNIGWPRNVSYAFNSYYQQHDQRLDSCYFGGLGLITTVDPSTDTC | |||
GH17 | 33 | 357 | 0 |
VGVNWGAASSSSHPLPPPKVVELLRSNNVSRVRLSDADPDVLLSLAGSGIAVTVGIPNLMLRTLNSSRKAAESWVHDNVTRYFPAGGPRVRIEYIAVGDD PFLLSHLDQFYPFVLGAATQIQAALTKANLGSKVKVVVPCSFDAFQSASNLPSEGHFRPDVNKTMIQLLTFLSEHRSPFFVSILPFLSFHQSKNISLDFA LFKGTARPHNDSHRIYKNSFDLSYDTLVTALYNAGFPQMEIVVAQIGWPTDGAANATSVIAEDFMKGLVDHIHSKTGTPLRPRNPPLEVYILSLLDEDQQ STSAGNFERHWGVFTFDGQAKYNVD |
Full Sequence |
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Protein Sequence Length: 495 Download |
MPPSTPRPLL RRLRLLAVAS LVGIAWWPRA GAVGVNWGAA SSSSHPLPPP KVVELLRSNN 60 VSRVRLSDAD PDVLLSLAGS GIAVTVGIPN LMLRTLNSSR KAAESWVHDN VTRYFPAGGP 120 RVRIEYIAVG DDPFLLSHLD QFYPFVLGAA TQIQAALTKA NLGSKVKVVV PCSFDAFQSA 180 SNLPSEGHFR PDVNKTMIQL LTFLSEHRSP FFVSILPFLS FHQSKNISLD FALFKGTARP 240 HNDSHRIYKN SFDLSYDTLV TALYNAGFPQ MEIVVAQIGW PTDGAANATS VIAEDFMKGL 300 VDHIHSKTGT PLRPRNPPLE VYILSLLDED QQSTSAGNFE RHWGVFTFDG QAKYNVDLGQ 360 GSRKLWNAQN VEYLPSRWCV VNNNENLSNA TASFLDACSV ADCTAVAPGG SCYNIGWPRN 420 VSYAFNSYYQ QHDQRLDSCY FGGLGLITTV DPSTDTCRFA VGLRTSHSSI LVSPQLLLMS 480 SLFTTILMVF IFFT* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
COG5309 | COG5309 | 0.0006 | 273 | 349 | 81 | + Exo-beta-1,3-glucanase [Carbohydrate transport and metabolism] | ||
pfam07983 | X8 | 7.0e-15 | 377 | 445 | 79 | + X8 domain. The X8 domain domain contains at least 6 conserved cysteine residues that presumably form three disulphide bridges. The domain is found in an Olive pollen allergen as well as at the C-terminus of several families of glycosyl hydrolases. This domain may be involved in carbohydrate binding. This domain is characteristic of GPI-anchored domains. | ||
smart00768 | X8 | 1.0e-29 | 378 | 459 | 84 | + Possibly involved in carbohydrate binding. The X8 domain, which may be involved in carbohydrate binding, is found in an Olive pollen antigen as well as at the C terminus of family 17 glycosyl hydrolases. It contains 6 conserved cysteine residues which presumably form three disulfide bridges. | ||
pfam00332 | Glyco_hydro_17 | 4.0e-62 | 33 | 357 | 326 | + Glycosyl hydrolases family 17. |
Gene Ontology | |
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GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005975 | carbohydrate metabolic process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | ABF95444.1 | 0 | 33 | 479 | 35 | 480 | Glycosyl hydrolases family 17 protein, expressed [Oryza sativa (japonica cultivar-group)] |
EMBL | CBI28434.1 | 0 | 29 | 491 | 19 | 486 | unnamed protein product [Vitis vinifera] |
RefSeq | NP_200656.2 | 0 | 32 | 469 | 25 | 454 | glycosyl hydrolase family 17 protein [Arabidopsis thaliana] |
RefSeq | XP_002269108.1 | 0 | 32 | 477 | 25 | 470 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002313970.1 | 0 | 32 | 491 | 21 | 480 | predicted protein [Populus trichocarpa] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 3f55_D | 5.04467e-44 | 33 | 358 | 2 | 315 | A Chain A, Crystal Structure Of Medicago Truncatula Ugt71g1 Complexed With Udp-Glucose |
PDB | 3f55_C | 5.04467e-44 | 33 | 358 | 2 | 315 | A Chain A, Crystal Structure Of Medicago Truncatula Ugt71g1 Complexed With Udp-Glucose |
PDB | 3f55_B | 5.04467e-44 | 33 | 358 | 2 | 315 | A Chain A, Crystal Structure Of Medicago Truncatula Ugt71g1 Complexed With Udp-Glucose |
PDB | 3f55_A | 5.04467e-44 | 33 | 358 | 2 | 315 | A Chain A, Crystal Structure Of Medicago Truncatula Ugt71g1 Complexed With Udp-Glucose |
PDB | 3em5_D | 5.04467e-44 | 33 | 358 | 2 | 315 | A Chain A, Crystal Structure Of A Native Endo Beta-1,3-Glucanase (Hev B 2), A Major Allergen From Hevea Brasiliensis |