| Basic Information | |
|---|---|
| Species | Zea mays |
| Cazyme ID | GRMZM2G004927_T01 |
| Family | CE8 |
| Protein Properties | Length: 347 Molecular Weight: 37828.9 Isoelectric Point: 8.5564 |
| Chromosome | Chromosome/Scaffold: 3 Start: 228719170 End: 228720718 |
| Description | Pectin lyase-like superfamily protein |
| View CDS | |
| External Links |
|---|
| NCBI Taxonomy |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
 | |||
| Family | Start | End | Evalue |
| CE8 | 60 | 336 | 0 |
| EEFKTVQSAIDAVPAGNAEWVIVHLRSGLHRGKVVIPENKPFIFVRGNGKGRTSISHESASSDNAESAAFTVNSDNVIVFGVSFRNSARVGLVNDPEIRS VAAMVAGDKVAFYHCAFYSPHHTLFDSAGRHYYESCYIQGNIDFIFGSGQSIFQCPEIFVRPDRRTEIRGSITAQVRQEEDSSGFVFLKGKVYGVGEVYL GRVTAPDSRVIFADTYLSKTIHPAGWTTIGYSGSTDKVTLAEFNCTGPGADVTNRVPWSRRFSPDDAAKYLTIDFIN | |||
| Full Sequence |
|---|
| Protein Sequence Length: 347 Download |
| MARPRLLLTF LLAAAAVLTT VPGVALAKSK LAKKSDDVVN GPLLTEKIQA KKTLIVGPDE 60 EFKTVQSAID AVPAGNAEWV IVHLRSGLHR GKVVIPENKP FIFVRGNGKG RTSISHESAS 120 SDNAESAAFT VNSDNVIVFG VSFRNSARVG LVNDPEIRSV AAMVAGDKVA FYHCAFYSPH 180 HTLFDSAGRH YYESCYIQGN IDFIFGSGQS IFQCPEIFVR PDRRTEIRGS ITAQVRQEED 240 SSGFVFLKGK VYGVGEVYLG RVTAPDSRVI FADTYLSKTI HPAGWTTIGY SGSTDKVTLA 300 EFNCTGPGAD VTNRVPWSRR FSPDDAAKYL TIDFINGKDW LPAYYY* |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
 | ||||||||
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| PLN02682 | PLN02682 | 8.0e-65 | 62 | 342 | 292 | + pectinesterase family protein | ||
| PLN02176 | PLN02176 | 8.0e-67 | 49 | 341 | 302 | + putative pectinesterase | ||
| PLN02432 | PLN02432 | 4.0e-67 | 61 | 341 | 283 | + putative pectinesterase | ||
| PLN02497 | PLN02497 | 1.0e-83 | 62 | 341 | 284 | + probable pectinesterase | ||
| PLN02480 | PLN02480 | 0 | 40 | 345 | 308 | + Probable pectinesterase | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0005618 | cell wall |
| GO:0030599 | pectinesterase activity |
| GO:0042545 | cell wall modification |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | ACU23222.1 | 0 | 1 | 344 | 1 | 345 | unknown [Glycine max] |
| GenBank | EAZ26679.1 | 0 | 23 | 288 | 24 | 287 | hypothetical protein OsJ_10583 [Oryza sativa Japonica Group] |
| RefSeq | NP_001049912.1 | 0 | 23 | 346 | 24 | 345 | Os03g0309400 [Oryza sativa (japonica cultivar-group)] |
| RefSeq | NP_001146436.1 | 0 | 1 | 346 | 1 | 346 | hypothetical protein LOC100280019 [Zea mays] |
| RefSeq | XP_002457946.1 | 0 | 36 | 346 | 36 | 346 | hypothetical protein SORBIDRAFT_03g022950 [Sorghum bicolor] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 1gq8_A | 5e-28 | 61 | 343 | 18 | 310 | A Chain A, Pectin Methylesterase From Carrot |
| PDB | 1xg2_A | 3e-21 | 61 | 341 | 14 | 304 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
| PDB | 2ntq_B | 0.0000000001 | 60 | 342 | 16 | 339 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
| PDB | 2ntq_A | 0.0000000001 | 60 | 342 | 16 | 339 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
| PDB | 2ntp_B | 0.0000000001 | 60 | 342 | 16 | 339 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
