| Basic Information | |
|---|---|
| Species | Zea mays |
| Cazyme ID | GRMZM2G086210_T01 |
| Family | AA3 |
| Protein Properties | Length: 600 Molecular Weight: 64801.3 Isoelectric Point: 7.0971 |
| Chromosome | Chromosome/Scaffold: 2 Start: 16342319 End: 16345001 |
| Description | Glucose-methanol-choline (GMC) oxidoreductase family protein |
| View CDS | |
| External Links |
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| NCBI Taxonomy |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
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| Family | Start | End | Evalue |
| AA3 | 45 | 588 | 0 |
| SVSYYDYIIVGGGTAGCPLAATLSERFRVLLLERGASPYDDDRIGDMARFADTLSDTSPGSPAQRFVSEDGVINSRPRVLGGGSCINAGFYTRASDDYVR GVGWDLGAAGAAYRWVEDVVAFQPELGPWQAALQGGLLEAGVAPDNGFTFDHFDGTKVGGSIFDADGRRHTAADLLRYARAEGLDVLLRARVAKILFFNV RGRRSGRRTAARGVVFHDSEGRMHKAFLSAGRRNEIILSAGAMGSPQLLMLSGVGPADHLRSFGIPLVRDHPAVGQGMSDNPMNAIYVPSPSPVEVSLIQ VVGITQVGSYIEGASGSNWGVRHSASGSGPDGVHRPRNFGMFSPQTGQLATVPPKQRTPEAIAHAAESMRQLDDSAFRGGFILEKVLGPLSTGHLELRNR DPDDNPLVTFNYFSHPEDLRRCVAGLSVIERVIHSQAFKNFTYPDFSMETLLNMSTGFPVNLLPRHDNDSTSLEMFCKDTVMTIWHYHGGCQVGRVVDAE YRVLGIDALRVIDGSTFNASPGTNPQATVMMLGRYMGVRITNER | |||
| Full Sequence |
|---|
| Protein Sequence Length: 600 Download |
| MSGRSRHFTM STLLATSFFF VLLCSSLQVR GVNYTFVKDA ALAPSVSYYD YIIVGGGTAG 60 CPLAATLSER FRVLLLERGA SPYDDDRIGD MARFADTLSD TSPGSPAQRF VSEDGVINSR 120 PRVLGGGSCI NAGFYTRASD DYVRGVGWDL GAAGAAYRWV EDVVAFQPEL GPWQAALQGG 180 LLEAGVAPDN GFTFDHFDGT KVGGSIFDAD GRRHTAADLL RYARAEGLDV LLRARVAKIL 240 FFNVRGRRSG RRTAARGVVF HDSEGRMHKA FLSAGRRNEI ILSAGAMGSP QLLMLSGVGP 300 ADHLRSFGIP LVRDHPAVGQ GMSDNPMNAI YVPSPSPVEV SLIQVVGITQ VGSYIEGASG 360 SNWGVRHSAS GSGPDGVHRP RNFGMFSPQT GQLATVPPKQ RTPEAIAHAA ESMRQLDDSA 420 FRGGFILEKV LGPLSTGHLE LRNRDPDDNP LVTFNYFSHP EDLRRCVAGL SVIERVIHSQ 480 AFKNFTYPDF SMETLLNMST GFPVNLLPRH DNDSTSLEMF CKDTVMTIWH YHGGCQVGRV 540 VDAEYRVLGI DALRVIDGST FNASPGTNPQ ATVMMLGRYM GVRITNERLA AEGLEGTKP* 600 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
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| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| PRK02106 | PRK02106 | 5.0e-14 | 433 | 577 | 151 | + choline dehydrogenase; Validated | ||
| PRK02106 | PRK02106 | 4.0e-28 | 49 | 324 | 321 | + choline dehydrogenase; Validated | ||
| TIGR01810 | betA | 1.0e-37 | 50 | 577 | 577 | + choline dehydrogenase. Choline dehydrogenase catalyzes the conversion of exogenously supplied choline into the intermediate glycine betaine aldehyde, as part of a two-step oxidative reaction leading to the formation of osmoprotectant betaine. This enzymatic system can be found in both gram-positive and gram-negative bacteria. As in Escherichia coli , Staphylococcus xylosus , and Sinorhizobium meliloti, this enzyme is found associated in a transciptionally co-induced gene cluster with betaine aldehyde dehydrogenase, the second catalytic enzyme in this reaction. Other gram-positive organisms have been shown to employ a different enzymatic system, utlizing a soluable choline oxidase or type III alcohol dehydrogenase instead of choline dehydrogenase. This enzyme is a member of the GMC oxidoreductase family (pfam00732 and pfam05199), sharing a common evoluntionary origin and enzymatic reaction with alcohol dehydrogenase. Outgrouping from this model, Caulobacter crescentus shares sequence homology with choline dehydrogenase, yet other genes participating in this enzymatic reaction have not currently been identified [Cellular processes, Adaptations to atypical conditions]. | ||
| COG2303 | BetA | 5.0e-45 | 49 | 591 | 588 | + Choline dehydrogenase and related flavoproteins [Amino acid transport and metabolism] | ||
| PLN02785 | PLN02785 | 0 | 10 | 592 | 600 | + Protein HOTHEAD | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0016614 | oxidoreductase activity, acting on CH-OH group of donors |
| GO:0050660 | flavin adenine dinucleotide binding |
| GO:0055114 | oxidation-reduction process |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| DDBJ | BAD29242.1 | 0 | 10 | 586 | 1 | 571 | putative mandelonitrile lyase [Oryza sativa Japonica Group] |
| GenBank | EAY87068.1 | 0 | 10 | 599 | 1 | 583 | hypothetical protein OsI_08464 [Oryza sativa Indica Group] |
| RefSeq | NP_001053612.1 | 0 | 10 | 594 | 11 | 586 | Os04g0573100 [Oryza sativa (japonica cultivar-group)] |
| RefSeq | NP_001146691.1 | 0 | 1 | 599 | 1 | 599 | hypothetical protein LOC100280292 [Zea mays] |
| RefSeq | XP_002446965.1 | 0 | 1 | 598 | 1 | 594 | hypothetical protein SORBIDRAFT_06g025960 [Sorghum bicolor] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 3gdp_B | 0 | 35 | 592 | 13 | 521 | A Chain A, Ascorbate Peroxidase W41a-h42m Mutant |
| PDB | 3gdp_A | 0 | 35 | 592 | 13 | 521 | A Chain A, Ascorbate Peroxidase W41a-h42m Mutant |
| PDB | 3gdn_B | 0 | 35 | 592 | 13 | 521 | A Chain A, Almond Hydroxynitrile Lyase In Complex With Benzaldehyde |
| PDB | 3gdn_A | 0 | 35 | 592 | 13 | 521 | A Chain A, Almond Hydroxynitrile Lyase In Complex With Benzaldehyde |
| PDB | 1ju2_B | 0 | 35 | 592 | 13 | 521 | A Chain A, Crystal Structure Of The Hydroxynitrile Lyase From Almond |
