| Basic Information | |
|---|---|
| Species | Zea mays |
| Cazyme ID | GRMZM2G127416_T01 |
| Family | GT47 |
| Protein Properties | Length: 485 Molecular Weight: 53906.2 Isoelectric Point: 9.42 |
| Chromosome | Chromosome/Scaffold: 10 Start: 2650257 End: 2653597 |
| Description | exostosin family protein |
| View CDS | |
| External Links |
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| NCBI Taxonomy |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
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| Family | Start | End | Evalue |
| GT47 | 106 | 422 | 0 |
| AVRVFMYDMPPEFHFGLLGWSPPSPDSVWPDVTAASPPPRYPGGLNQQHSVEYWLTLDLLSSSPPCGRHSAVRVSDSRDADLVFVPFFASLSYNRHYRPV PPEKVSRDRVLQEKLVRYLAARPEWRRYGGADHVIVAHHPNSLLHARAVLHPAVFVLSDFGRYPPRVASLEKDVIAPYKHMAKTYANDSAGFDDRPTLLY FRGAIYRKEGGSIRQELYYMLKEEKDVYFSFGSVQDHGASKASQGMHSSKFCLNIAGDTPSSNRLFDAIVTHCVPVIISDDIELPYEDVLDYSKFSIFVR SSDAVKKGYLMRLLSGV | |||
| Full Sequence |
|---|
| Protein Sequence Length: 485 Download |
| MAPRGRTLLP LAAATVLVAS TIFLFAAAGA RWRPADTDLP VPPHAFPTAV PAAVTASSYS 60 NATAGKELSF LDENGRPDDP SSASASSSTS GATPAAGVVR CDPRDAVRVF MYDMPPEFHF 120 GLLGWSPPSP DSVWPDVTAA SPPPRYPGGL NQQHSVEYWL TLDLLSSSPP CGRHSAVRVS 180 DSRDADLVFV PFFASLSYNR HYRPVPPEKV SRDRVLQEKL VRYLAARPEW RRYGGADHVI 240 VAHHPNSLLH ARAVLHPAVF VLSDFGRYPP RVASLEKDVI APYKHMAKTY ANDSAGFDDR 300 PTLLYFRGAI YRKEGGSIRQ ELYYMLKEEK DVYFSFGSVQ DHGASKASQG MHSSKFCLNI 360 AGDTPSSNRL FDAIVTHCVP VIISDDIELP YEDVLDYSKF SIFVRSSDAV KKGYLMRLLS 420 GVSKQQWTKM WDRLKEVDKH FEYQYPSQKD DAVQMIWQAL SRKVPSIKLK VHRSNRFSRS 480 NRGK* |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
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| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| pfam03016 | Exostosin | 1.0e-58 | 103 | 411 | 319 | + Exostosin family. The EXT family is a family of tumour suppressor genes. Mutations of EXT1 on 8q24.1, EXT2 on 11p11-13, and EXT3 on 19p have been associated with the autosomal dominant disorder known as hereditary multiple exostoses (HME). This is the most common known skeletal dysplasia. The chromosomal locations of other EXT genes suggest association with other forms of neoplasia. EXT1 and EXT2 have both been shown to encode a heparan sulphate polymerase with both D-glucuronyl (GlcA) and N-acetyl-D-glucosaminoglycan (GlcNAC) transferase activities. The nature of the defect in heparan sulphate biosynthesis in HME is unclear. | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0016020 | membrane |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | ABA91286.2 | 0 | 29 | 483 | 30 | 474 | secondary cell wall-related glycosyltransferase family 47, putative, expressed [Oryza sativa (japonica cultivar-group)] |
| GenBank | EEC67582.1 | 0 | 29 | 483 | 30 | 481 | hypothetical protein OsI_34941 [Oryza sativa Indica Group] |
| GenBank | EEE52679.1 | 0 | 36 | 484 | 85 | 528 | hypothetical protein OsJ_35064 [Oryza sativa Japonica Group] |
| RefSeq | NP_001066040.1 | 0 | 29 | 484 | 30 | 475 | Os12g0124400 [Oryza sativa (japonica cultivar-group)] |
| RefSeq | NP_001151894.1 | 0 | 1 | 484 | 1 | 488 | secondary cell wall-related glycosyltransferase family 47 [Zea mays] |
