| Basic Information | |
|---|---|
| Species | Zea mays |
| Cazyme ID | GRMZM2G141094_T02 |
| Family | GT47 |
| Protein Properties | Length: 207 Molecular Weight: 23056.6 Isoelectric Point: 4.8238 |
| Chromosome | Chromosome/Scaffold: 1 Start: 54571649 End: 54572992 |
| Description | Exostosin family protein |
| View CDS | |
| External Links |
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| NCBI Taxonomy |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
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| Family | Start | End | Evalue |
| GT47 | 9 | 134 | 4.30058e-42 |
| DTPRSIFVYFRGLFYDTSNDPEGGYYARGACASVWENFKNNPLFDISTDHPPTYYEDMQRSVFCLCPLGWAPWSPRLVEAVVFGCIPVIIADDIVLPFAD AIPWEEIGVFVAEEDVPKLDSILMSI | |||
| Full Sequence |
|---|
| Protein Sequence Length: 207 Download |
| MQAHLIPVDT PRSIFVYFRG LFYDTSNDPE GGYYARGACA SVWENFKNNP LFDISTDHPP 60 TYYEDMQRSV FCLCPLGWAP WSPRLVEAVV FGCIPVIIAD DIVLPFADAI PWEEIGVFVA 120 EEDVPKLDSI LMSIPTDVIL RKQRLLANPS MKQAMLFPQP AQAGDAFHQI LNGLARKLLH 180 GDGVFLKPGE RVLKWTAGPP GDLKPW* |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
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| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| pfam03016 | Exostosin | 5.0e-39 | 5 | 134 | 134 | + Exostosin family. The EXT family is a family of tumour suppressor genes. Mutations of EXT1 on 8q24.1, EXT2 on 11p11-13, and EXT3 on 19p have been associated with the autosomal dominant disorder known as hereditary multiple exostoses (HME). This is the most common known skeletal dysplasia. The chromosomal locations of other EXT genes suggest association with other forms of neoplasia. EXT1 and EXT2 have both been shown to encode a heparan sulphate polymerase with both D-glucuronyl (GlcA) and N-acetyl-D-glucosaminoglycan (GlcNAC) transferase activities. The nature of the defect in heparan sulphate biosynthesis in HME is unclear. | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0016020 | membrane |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | ACF86410.1 | 0 | 1 | 206 | 212 | 418 | unknown [Zea mays] |
| RefSeq | NP_001045264.1 | 0 | 1 | 206 | 212 | 417 | Os01g0926700 [Oryza sativa (japonica cultivar-group)] |
| RefSeq | NP_001149319.1 | 0 | 1 | 206 | 216 | 421 | secondary cell wall-related glycosyltransferase family 47 [Zea mays] |
| RefSeq | NP_001150738.1 | 0 | 1 | 206 | 210 | 415 | secondary cell wall-related glycosyltransferase family 47 [Zea mays] |
| RefSeq | XP_002459017.1 | 0 | 1 | 206 | 215 | 420 | hypothetical protein SORBIDRAFT_03g044530 [Sorghum bicolor] |
| Hydropathy |
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