| Basic Information | |
|---|---|
| Species | Zea mays |
| Cazyme ID | GRMZM2G162333_T01 |
| Family | CE8 |
| Protein Properties | Length: 205 Molecular Weight: 22045.4 Isoelectric Point: 10.6711 |
| Chromosome | Chromosome/Scaffold: 2 Start: 19264742 End: 19267211 |
| Description | Pectin lyase-like superfamily protein |
| View CDS | |
| External Links |
|---|
| NCBI Taxonomy |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
 | |||
| Family | Start | End | Evalue |
| CE8 | 49 | 152 | 6.3e-29 |
| IVVDAGGAGDFVSIQRAVDSVPEGNTVRVIVQINAGTYIEKVVVPASKPYVTFQGAGRDVTVVEWHDRASDRGPDGQPLRTYNTASVTILANYFNAKNIS FKVS | |||
| Full Sequence |
|---|
| Protein Sequence Length: 205 Download |
| MARILVLALL TIASLLLPPV VASQQAAAKC EYRKHSGHRY RHPVGVRKIV VDAGGAGDFV 60 SIQRAVDSVP EGNTVRVIVQ INAGTYIEKV VVPASKPYVT FQGAGRDVTV VEWHDRASDR 120 GPDGQPLRTY NTASVTILAN YFNAKNISFK VSSRLPSRPP STWPRDDGAA GAGKVTKPLR 180 ESQVSGLLLL NAAVSVYLVP FRKF* |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
 | ||||||||
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| PLN02665 | PLN02665 | 2.0e-22 | 46 | 157 | 112 | + pectinesterase family protein | ||
| PLN02304 | PLN02304 | 7.0e-23 | 49 | 169 | 122 | + probable pectinesterase | ||
| PLN02671 | PLN02671 | 5.0e-29 | 45 | 150 | 108 | + pectinesterase | ||
| PLN02682 | PLN02682 | 3.0e-38 | 47 | 171 | 126 | + pectinesterase family protein | ||
| PLN02634 | PLN02634 | 1.0e-76 | 21 | 156 | 137 | + probable pectinesterase | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0005618 | cell wall |
| GO:0030599 | pectinesterase activity |
| GO:0042545 | cell wall modification |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | ABK27127.1 | 1.4013e-45 | 7 | 163 | 15 | 170 | unknown [Picea sitchensis] |
| GenBank | ACL53825.1 | 0 | 1 | 156 | 1 | 156 | unknown [Zea mays] |
| EMBL | CAD41229.2 | 0 | 5 | 163 | 1 | 158 | OSJNBa0010H02.16 [Oryza sativa (japonica cultivar-group)] |
| RefSeq | XP_002303355.1 | 0 | 34 | 163 | 2 | 130 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002448293.1 | 0 | 1 | 156 | 3 | 157 | hypothetical protein SORBIDRAFT_06g024730 [Sorghum bicolor] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 1gq8_A | 0.00000000009 | 48 | 150 | 8 | 104 | A Chain A, Pectin Methylesterase From Carrot |
| PDB | 3uw0_A | 0.00006 | 58 | 158 | 43 | 140 | A Chain A, Pectin Methylesterase From Yersinia Enterocolitica |
