| Basic Information | |
|---|---|
| Species | Zea mays |
| Cazyme ID | GRMZM2G162333_T02 |
| Family | CE8 |
| Protein Properties | Length: 350 Molecular Weight: 38392.4 Isoelectric Point: 8.9237 |
| Chromosome | Chromosome/Scaffold: 2 Start: 19264742 End: 19267163 |
| Description | Pectin lyase-like superfamily protein |
| View CDS | |
| External Links |
|---|
| NCBI Taxonomy |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
 | |||
| Family | Start | End | Evalue |
| CE8 | 49 | 340 | 0 |
| IVVDAGGAGDFVSIQRAVDSVPEGNTVRVIVQINAGTYIEKVVVPASKPYVTFQGAGRDVTVVEWHDRASDRGPDGQPLRTYNTASVTILANYFNAKNIS FKNTAPAPMPGTQGGQAVAFRISGDKAFFFGCGFYGAQDTLCDDAGRHYFRDCYIEGSIDFVFGNARSLYKDCELHSTAQRFGSVAAHGRRDPCERTGFA FVNCRVTGTGRLYVGRAMGQYSRIVYAYTYFDSVIAPGGWDDWDHTSNKSMTAFFGMYRNWGPGVDAVHGVSWARELDYFAARPFLGKSFVN | |||
| Full Sequence |
|---|
| Protein Sequence Length: 350 Download |
| MARILVLALL TIASLLLPPV VASQQAAAKC EYRKHSGHRY RHPVGVRKIV VDAGGAGDFV 60 SIQRAVDSVP EGNTVRVIVQ INAGTYIEKV VVPASKPYVT FQGAGRDVTV VEWHDRASDR 120 GPDGQPLRTY NTASVTILAN YFNAKNISFK NTAPAPMPGT QGGQAVAFRI SGDKAFFFGC 180 GFYGAQDTLC DDAGRHYFRD CYIEGSIDFV FGNARSLYKD CELHSTAQRF GSVAAHGRRD 240 PCERTGFAFV NCRVTGTGRL YVGRAMGQYS RIVYAYTYFD SVIAPGGWDD WDHTSNKSMT 300 AFFGMYRNWG PGVDAVHGVS WARELDYFAA RPFLGKSFVN GYHWLTPDV* |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
 | ||||||||
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| PLN02665 | PLN02665 | 4.0e-105 | 46 | 347 | 304 | + pectinesterase family protein | ||
| PLN02304 | PLN02304 | 3.0e-107 | 49 | 347 | 309 | + probable pectinesterase | ||
| PLN02671 | PLN02671 | 2.0e-114 | 45 | 345 | 303 | + pectinesterase | ||
| PLN02682 | PLN02682 | 4.0e-140 | 47 | 347 | 302 | + pectinesterase family protein | ||
| PLN02634 | PLN02634 | 0 | 21 | 347 | 328 | + probable pectinesterase | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0005618 | cell wall |
| GO:0030599 | pectinesterase activity |
| GO:0042545 | cell wall modification |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | ACL53825.1 | 0 | 24 | 349 | 24 | 349 | unknown [Zea mays] |
| EMBL | CAD41229.2 | 0 | 5 | 349 | 1 | 344 | OSJNBa0010H02.16 [Oryza sativa (japonica cultivar-group)] |
| EMBL | CBI31927.1 | 0 | 7 | 347 | 8 | 346 | unnamed protein product [Vitis vinifera] |
| RefSeq | XP_002303355.1 | 0 | 38 | 347 | 5 | 314 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002448293.1 | 0 | 1 | 349 | 3 | 350 | hypothetical protein SORBIDRAFT_06g024730 [Sorghum bicolor] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 1gq8_A | 0 | 48 | 345 | 8 | 308 | A Chain A, Pectin Methylesterase From Carrot |
| PDB | 1xg2_A | 1e-35 | 50 | 345 | 6 | 304 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
| PDB | 3uw0_A | 8e-18 | 50 | 255 | 34 | 253 | A Chain A, Pectin Methylesterase From Yersinia Enterocolitica |
| PDB | 1qjv_B | 8e-17 | 59 | 225 | 18 | 192 | A Chain A, Pectin Methylesterase Pema From Erwinia Chrysanthemi |
| PDB | 1qjv_A | 8e-17 | 59 | 225 | 18 | 192 | A Chain A, Pectin Methylesterase Pema From Erwinia Chrysanthemi |
