| Basic Information | |
|---|---|
| Species | Zea mays |
| Cazyme ID | GRMZM2G166906_T02 |
| Family | AA3 |
| Protein Properties | Length: 577 Molecular Weight: 61988.6 Isoelectric Point: 8.8633 |
| Chromosome | Chromosome/Scaffold: 5 Start: 196033677 End: 196036068 |
| Description | Glucose-methanol-choline (GMC) oxidoreductase family protein |
| View CDS | |
| External Links |
|---|
| NCBI Taxonomy |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
 | |||
| Family | Start | End | Evalue |
| AA3 | 40 | 570 | 0 |
| YDYIIVGGGTAGCPLAATLSARARVLLLERGGSPYEDARVLNMAHFSDVLADTSASSPSQRFVSEDGVINSRPRVLGGGSCINAGFFTRAGAGYVRAAGW DPREVRAAYRWVEDVVAFRPALGPWQAAVRMGLLETGVLPDNGATYDHIPGTKVGGSIFDADGRRHTAADLLRYANPDGIDLYLRARVAKILFRFKGTKP VADGVVYYDSRGNTHEAYLSPGAASEVILSAGALGSPQQLMLSGIGPADHLRSLGIDVILDLPGVGQGMSDNPMNAIYVPSPSPVEVSLIQVVGITRFGS YIEGASGANWNSHPSGTQPPPPPPRNFGMFSPQTGQLATVPPKERTPEAIARAVEAMSQVPDAALRGGFILEKVLGPQSVGQLALRNLNPDDNPSVRFNY FAHPDDLRRCVAGIAAIERVIRSRAFSRFTYQNFAFPAALNVTAEFPVNTLYRRGGDPRALERFCRDTVMTIWHYHGGCQVGRVVDRDYRVLGVDALRVI DGSTFNASPGTNPQATVMMLGRYMGVKLLKE | |||
| Full Sequence |
|---|
| Protein Sequence Length: 577 Download |
| MATILTVASF FALVCISQQA RAANYTFMKD AVHAPRTGFY DYIIVGGGTA GCPLAATLSA 60 RARVLLLERG GSPYEDARVL NMAHFSDVLA DTSASSPSQR FVSEDGVINS RPRVLGGGSC 120 INAGFFTRAG AGYVRAAGWD PREVRAAYRW VEDVVAFRPA LGPWQAAVRM GLLETGVLPD 180 NGATYDHIPG TKVGGSIFDA DGRRHTAADL LRYANPDGID LYLRARVAKI LFRFKGTKPV 240 ADGVVYYDSR GNTHEAYLSP GAASEVILSA GALGSPQQLM LSGIGPADHL RSLGIDVILD 300 LPGVGQGMSD NPMNAIYVPS PSPVEVSLIQ VVGITRFGSY IEGASGANWN SHPSGTQPPP 360 PPPRNFGMFS PQTGQLATVP PKERTPEAIA RAVEAMSQVP DAALRGGFIL EKVLGPQSVG 420 QLALRNLNPD DNPSVRFNYF AHPDDLRRCV AGIAAIERVI RSRAFSRFTY QNFAFPAALN 480 VTAEFPVNTL YRRGGDPRAL ERFCRDTVMT IWHYHGGCQV GRVVDRDYRV LGVDALRVID 540 GSTFNASPGT NPQATVMMLG RYMGVKLLKE RMLLEG* |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
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| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| PRK02106 | PRK02106 | 2.0e-12 | 416 | 560 | 149 | + choline dehydrogenase; Validated | ||
| pfam05199 | GMC_oxred_C | 1.0e-24 | 416 | 560 | 150 | + GMC oxidoreductase. This domain found associated with pfam00732. | ||
| PRK02106 | PRK02106 | 4.0e-32 | 40 | 310 | 325 | + choline dehydrogenase; Validated | ||
| COG2303 | BetA | 6.0e-48 | 40 | 573 | 590 | + Choline dehydrogenase and related flavoproteins [Amino acid transport and metabolism] | ||
| PLN02785 | PLN02785 | 0 | 10 | 572 | 582 | + Protein HOTHEAD | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0016614 | oxidoreductase activity, acting on CH-OH group of donors |
| GO:0050660 | flavin adenine dinucleotide binding |
| GO:0055114 | oxidation-reduction process |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | ACN31684.1 | 0 | 1 | 576 | 1 | 576 | unknown [Zea mays] |
| GenBank | EAY87068.1 | 0 | 13 | 576 | 16 | 578 | hypothetical protein OsI_08464 [Oryza sativa Indica Group] |
| RefSeq | NP_001047732.1 | 0 | 13 | 561 | 16 | 563 | Os02g0678300 [Oryza sativa (japonica cultivar-group)] |
| RefSeq | NP_001149739.1 | 0 | 1 | 576 | 1 | 576 | protein HOTHEAD [Zea mays] |
| RefSeq | XP_002454481.1 | 0 | 4 | 575 | 13 | 583 | hypothetical protein SORBIDRAFT_04g031910 [Sorghum bicolor] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 3gdp_B | 0 | 26 | 571 | 13 | 517 | A Chain A, Crystal Structural Analysis Of Active Site Mutant Q189e Of Lgtc |
| PDB | 3gdp_A | 0 | 26 | 571 | 13 | 517 | A Chain A, Crystal Structural Analysis Of Active Site Mutant Q189e Of Lgtc |
| PDB | 3gdn_B | 0 | 26 | 571 | 13 | 517 | A Chain A, Almond Hydroxynitrile Lyase In Complex With Benzaldehyde |
| PDB | 3gdn_A | 0 | 26 | 571 | 13 | 517 | A Chain A, Almond Hydroxynitrile Lyase In Complex With Benzaldehyde |
| PDB | 1ju2_B | 0 | 26 | 571 | 13 | 517 | A Chain A, Crystal Structure Of The Hydroxynitrile Lyase From Almond |
