| Basic Information | |
|---|---|
| Species | Zea mays |
| Cazyme ID | GRMZM2G308707_T02 |
| Family | GH2 |
| Protein Properties | Length: 1004 Molecular Weight: 113248 Isoelectric Point: 6.7561 |
| Chromosome | Chromosome/Scaffold: 6 Start: 143920912 End: 143955690 |
| Description | glycoside hydrolase family 2 protein |
| View CDS | |
| External Links |
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| NCBI Taxonomy |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
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| Family | Start | End | Evalue |
| GH2 | 41 | 791 | 0 |
| PAAPWMSAAVPGTVLGTLLKNKLIPDPFYGLNNQAIIDIADAGREYYTFWFFTTFQCALSGNQHATLNFRGINYSAEMYLNGHKEVLPKGMFRRHNIDIT DILHPDGNNLLAVLVHPPDHPGKIPPQGGQGGDHEIGKDVATQYVEGWDWMCPIRDRNTGIWDEVSISISGPVNITDPHLVSTFHDDFKRSYLHCTLQLE NKSSWIADCTLKIQVSTELEGNICLVEHLQSYAITVPPQSDIEYTIPSLFFYKPNLWWPNGMGKQSLYNIEISVDVKGFGESDSWSHYFGFRKIESTIDD STGGRIFKVNGEPIFIRGGNWILSDGLLRLTKKRYMTDIKFHADMNFNMLRCWGGGLAERPDFYHFCDVYGLMALKLPVLVPIMTESTFPKWWKKSKKVW QEFWITGDVDGRGIPVSNPNGPLDHDLFLLCARDTVKLLRNHASLALWVGGNEQVPPVDINKALKNDLKLHPMFVSYQTSKSEVIYLSEESTDPSKYLDG TRVYVQGSMWDGFANGKGDFTDGPYEIQYPESFFKDSFYKYGFNPEVGSVGVPVAATIRATMPPVGWSIPILKKRIDGYIEEVPNPIWDYHKYIPYSKPG KVHDQIELYGAPKDLDDFCEKAQLVNYVQYRALLEGWTSFMWTKFTGVLIWKTQNPWTGLRGQFYDHLQDQTAGFYGCRCAAQPIHVQLNLVTYFVEVVN TTADELKDMAVEISVWDLDGACPYYKVTEKIVIPPKKVKQIIEMKYPKMKD | |||
| Full Sequence |
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| Protein Sequence Length: 1004 Download |
| MSVAVGKRVL DTGWLAARST EVALTGVQLT TTHPPAADPA PAAPWMSAAV PGTVLGTLLK 60 NKLIPDPFYG LNNQAIIDIA DAGREYYTFW FFTTFQCALS GNQHATLNFR GINYSAEMYL 120 NGHKEVLPKG MFRRHNIDIT DILHPDGNNL LAVLVHPPDH PGKIPPQGGQ GGDHEIGKDV 180 ATQYVEGWDW MCPIRDRNTG IWDEVSISIS GPVNITDPHL VSTFHDDFKR SYLHCTLQLE 240 NKSSWIADCT LKIQVSTELE GNICLVEHLQ SYAITVPPQS DIEYTIPSLF FYKPNLWWPN 300 GMGKQSLYNI EISVDVKGFG ESDSWSHYFG FRKIESTIDD STGGRIFKVN GEPIFIRGGN 360 WILSDGLLRL TKKRYMTDIK FHADMNFNML RCWGGGLAER PDFYHFCDVY GLMALKLPVL 420 VPIMTESTFP KWWKKSKKVW QEFWITGDVD GRGIPVSNPN GPLDHDLFLL CARDTVKLLR 480 NHASLALWVG GNEQVPPVDI NKALKNDLKL HPMFVSYQTS KSEVIYLSEE STDPSKYLDG 540 TRVYVQGSMW DGFANGKGDF TDGPYEIQYP ESFFKDSFYK YGFNPEVGSV GVPVAATIRA 600 TMPPVGWSIP ILKKRIDGYI EEVPNPIWDY HKYIPYSKPG KVHDQIELYG APKDLDDFCE 660 KAQLVNYVQY RALLEGWTSF MWTKFTGVLI WKTQNPWTGL RGQFYDHLQD QTAGFYGCRC 720 AAQPIHVQLN LVTYFVEVVN TTADELKDMA VEISVWDLDG ACPYYKVTEK IVIPPKKVKQ 780 IIEMKYPKMK DAKPVYFLLL KLFRLSDNGT ISRNFYWLHL PGQDYKSLEQ YQQKKIPLKI 840 DSDVSVSGTR HKVRMTVENI SKKSVVDSTR SVSAMDLGDA SGSHSTRKET TRKGNGSDGL 900 WRKIRSGLGV ARPSDNRRTL EVSGTDSGVA FFLHFSVHTS ESSTDGEEYN DTRILPVHYS 960 DNYFSLTPGE NMAVDISFEA PQGSSPRVVL RGWNHHLDHA VMI* |
| Functional Domains Download unfiltered results here | ||||||||
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| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| pfam02837 | Glyco_hydro_2_N | 2.0e-5 | 88 | 156 | 70 | + Glycosyl hydrolases family 2, sugar binding domain. This family contains beta-galactosidase, beta-mannosidase and beta-glucuronidase activities and has a jelly-roll fold. | ||
| PRK10340 | ebgA | 5.0e-8 | 102 | 412 | 326 | + cryptic beta-D-galactosidase subunit alpha; Reviewed | ||
| pfam00703 | Glyco_hydro_2 | 2.0e-11 | 215 | 332 | 118 | + Glycosyl hydrolases family 2. This family contains beta-galactosidase, beta-mannosidase and beta-glucuronidase activities. | ||
| COG3250 | LacZ | 5.0e-29 | 63 | 699 | 659 | + Beta-galactosidase/beta-glucuronidase [Carbohydrate transport and metabolism] | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
| GO:0005975 | carbohydrate metabolic process |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | EEC79162.1 | 0 | 5 | 1003 | 16 | 985 | hypothetical protein OsI_19836 [Oryza sativa Indica Group] |
| RefSeq | NP_001055444.1 | 0 | 6 | 1003 | 16 | 984 | Os05g0391500 [Oryza sativa (japonica cultivar-group)] |
| RefSeq | XP_002319539.1 | 0 | 5 | 1001 | 4 | 972 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002439742.1 | 0 | 1 | 1003 | 1 | 978 | hypothetical protein SORBIDRAFT_09g019350 [Sorghum bicolor] |
| RefSeq | XP_002512381.1 | 0 | 5 | 1002 | 4 | 973 | beta-mannosidase, putative [Ricinus communis] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 2vzo_B | 0 | 41 | 818 | 77 | 767 | A Chain A, Crystal Structure Of Amycolatopsis Orientalis Exo- Chitosanase Csxa |
| PDB | 2vzo_A | 0 | 41 | 818 | 77 | 767 | A Chain A, Crystal Structure Of Amycolatopsis Orientalis Exo- Chitosanase Csxa |
| PDB | 2x09_B | 0 | 41 | 818 | 77 | 767 | A Chain A, Crystal Structure Of Amycolatopsis Orientalis Exo- Chitosanase Csxa |
| Hydropathy |
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