| Basic Information | |
|---|---|
| Species | Zea mays |
| Cazyme ID | GRMZM2G322047_T01 |
| Family | GT47 |
| Protein Properties | Length: 545 Molecular Weight: 62417.1 Isoelectric Point: 9.7334 |
| Chromosome | Chromosome/Scaffold: 8 Start: 8014962 End: 8018180 |
| Description | Exostosin family protein |
| View CDS | |
| External Links |
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| NCBI Taxonomy |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
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| Family | Start | End | Evalue |
| GT47 | 211 | 497 | 0 |
| RLLKVFIYHDGAKPIFHSPELKGIYASEGWFMKLMETNQNFVVRDPNTAHLFYLPYSSRQLEHNLYVPGSNTIEPLSIFVKNYIDLISAKYPYWNRTKGA DHFFVACHDWGPYTTKLHDELRKNTIKALCNADLSEGFFIRGKDVSLPETFLRSPRRPLRDIGGRPAAQRTILAFFAGQMHGRVRPVLLKYWGNKDDDMR IYSRLPHRITRKRNYVQHMKSSKYCICPMGYEVNSPRIVEAIYYECVPVIIADHFVLPFDAALNWSTFSVVVPESDVPKLKQILLAI | |||
| Full Sequence |
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| Protein Sequence Length: 545 Download |
| MALLSLRTPP WGYPQGDSGG RSRGRKLRGP RRLDVVAIRS AAFFLRRDRQ PFETLKSRLQ 60 IGVNPGTIVI NLSARIAPAA APSMFLAPSS SPAEIFYDGS MEEPEHPDIK LLMTLQRNPP 120 KESSPFLKEE PIFSGLPTMS SDVNGENVMD TKSVLPVTPE APLWSTAADE ELIYAKKEIT 180 NAPLTSDDPD LYAPLFRNVS IFKRSYELME RLLKVFIYHD GAKPIFHSPE LKGIYASEGW 240 FMKLMETNQN FVVRDPNTAH LFYLPYSSRQ LEHNLYVPGS NTIEPLSIFV KNYIDLISAK 300 YPYWNRTKGA DHFFVACHDW GPYTTKLHDE LRKNTIKALC NADLSEGFFI RGKDVSLPET 360 FLRSPRRPLR DIGGRPAAQR TILAFFAGQM HGRVRPVLLK YWGNKDDDMR IYSRLPHRIT 420 RKRNYVQHMK SSKYCICPMG YEVNSPRIVE AIYYECVPVI IADHFVLPFD AALNWSTFSV 480 VVPESDVPKL KQILLAIPES RYITLQANVK RVQKHFMWHP NPVKYDIFHM ILHSVWFSRV 540 NQIR* |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
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| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| pfam03016 | Exostosin | 1.0e-66 | 209 | 497 | 305 | + Exostosin family. The EXT family is a family of tumour suppressor genes. Mutations of EXT1 on 8q24.1, EXT2 on 11p11-13, and EXT3 on 19p have been associated with the autosomal dominant disorder known as hereditary multiple exostoses (HME). This is the most common known skeletal dysplasia. The chromosomal locations of other EXT genes suggest association with other forms of neoplasia. EXT1 and EXT2 have both been shown to encode a heparan sulphate polymerase with both D-glucuronyl (GlcA) and N-acetyl-D-glucosaminoglycan (GlcNAC) transferase activities. The nature of the defect in heparan sulphate biosynthesis in HME is unclear. | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0016020 | membrane |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| EMBL | CBI23466.1 | 0 | 163 | 544 | 153 | 534 | unnamed protein product [Vitis vinifera] |
| GenBank | EEC69788.1 | 0 | 65 | 544 | 70 | 534 | hypothetical protein OsI_00072 [Oryza sativa Indica Group] |
| RefSeq | NP_001041784.1 | 0 | 65 | 544 | 71 | 548 | Os01g0107700 [Oryza sativa (japonica cultivar-group)] |
| RefSeq | XP_002269459.1 | 0 | 163 | 544 | 153 | 534 | PREDICTED: hypothetical protein [Vitis vinifera] |
| RefSeq | XP_002457517.1 | 0 | 70 | 544 | 97 | 521 | hypothetical protein SORBIDRAFT_03g008610 [Sorghum bicolor] |
| Metabolic Pathways | |||
|---|---|---|---|
| Pathway Name | Reaction | EC | Protein Name |
| xylogalacturonan biosynthesis | RXN-9589 | EC-2.4.2.41 | xylogalacturonan β-1,3-xylosyltransferase |
| Hydropathy |
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