| Basic Information | |
|---|---|
| Species | Zea mays |
| Cazyme ID | GRMZM2G455564_T01 |
| Family | CE8 |
| Protein Properties | Length: 427 Molecular Weight: 46795.7 Isoelectric Point: 5.9776 |
| Chromosome | Chromosome/Scaffold: 10 Start: 63783476 End: 63785550 |
| Description | Pectin lyase-like superfamily protein |
| View CDS | |
| External Links |
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| NCBI Taxonomy |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
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| Family | Start | End | Evalue |
| CE8 | 120 | 412 | 0 |
| CVDPNGCCDFTTVQAAVNAVPNHSSKRNVVWINRGIYFEKVTVPASKPNITFQGQGFHLTAIAWNDTAKSANGTFYSASVSVFASGFIGKNISFINVAPI PRPGAVDAQAVAIRINGDQAAFWGCGFFGAQDTLHDDRGRHYFKECFIQGSIDFIFGDARSLYENCRLISIADPVPSGQRSITGSVTAHARESEDDNTGY SFVNCSIGGTGSIWLGRAWRPYSRVIFAYTSMSDIIASEGWNDWNDQTRDQTVFYGEYKCTGDGANLADRVPYAQKLSDVQVLPYLNTSFIDG | |||
| Full Sequence |
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| Protein Sequence Length: 427 Download |
| MQFKLLGAVH FIMLKYPQIQ RPNSELSSCM QMSAKTIVAA AAAAFLFYTH LYFPTAAHLY 60 SSTTPLAGTL FDLTMPPPLY PLSADSTSIH HQYGCRYNPL CDDFPPDFPP ADTPALSIFC 120 VDPNGCCDFT TVQAAVNAVP NHSSKRNVVW INRGIYFEKV TVPASKPNIT FQGQGFHLTA 180 IAWNDTAKSA NGTFYSASVS VFASGFIGKN ISFINVAPIP RPGAVDAQAV AIRINGDQAA 240 FWGCGFFGAQ DTLHDDRGRH YFKECFIQGS IDFIFGDARS LYENCRLISI ADPVPSGQRS 300 ITGSVTAHAR ESEDDNTGYS FVNCSIGGTG SIWLGRAWRP YSRVIFAYTS MSDIIASEGW 360 NDWNDQTRDQ TVFYGEYKCT GDGANLADRV PYAQKLSDVQ VLPYLNTSFI DGDQWLKPYC 420 DSLISA* |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
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| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| PLN02671 | PLN02671 | 1.0e-99 | 118 | 417 | 308 | + pectinesterase | ||
| PLN02634 | PLN02634 | 1.0e-104 | 121 | 418 | 305 | + probable pectinesterase | ||
| PLN02665 | PLN02665 | 7.0e-115 | 121 | 418 | 299 | + pectinesterase family protein | ||
| PLN02682 | PLN02682 | 1.0e-127 | 128 | 418 | 297 | + pectinesterase family protein | ||
| PLN02304 | PLN02304 | 0 | 54 | 421 | 379 | + probable pectinesterase | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0005618 | cell wall |
| GO:0030599 | pectinesterase activity |
| GO:0042545 | cell wall modification |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | ABN08648.1 | 0 | 100 | 417 | 71 | 388 | Pectinesterase [Medicago truncatula] |
| GenBank | EEC83093.1 | 0 | 32 | 426 | 1 | 394 | hypothetical protein OsI_28228 [Oryza sativa Indica Group] |
| GenBank | EEE68230.1 | 0 | 68 | 426 | 158 | 519 | hypothetical protein OsJ_26414 [Oryza sativa Japonica Group] |
| RefSeq | XP_002445213.1 | 0 | 30 | 426 | 1 | 399 | hypothetical protein SORBIDRAFT_07g006050 [Sorghum bicolor] |
| RefSeq | XP_002521065.1 | 0 | 47 | 419 | 32 | 394 | Pectinesterase-1 precursor, putative [Ricinus communis] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 1gq8_A | 0 | 120 | 417 | 10 | 309 | A Chain A, Pectin Methylesterase From Carrot |
| PDB | 1xg2_A | 3.99931e-42 | 120 | 423 | 6 | 315 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
| PDB | 2ntq_B | 6e-17 | 129 | 410 | 18 | 334 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
| PDB | 2ntq_A | 6e-17 | 129 | 410 | 18 | 334 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
| PDB | 2ntp_B | 6e-17 | 129 | 410 | 18 | 334 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
| Hydropathy |
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