| Basic Information | |
|---|---|
| Species | Zea mays |
| Cazyme ID | GRMZM5G898668_T01 |
| Family | GT47 |
| Protein Properties | Length: 419 Molecular Weight: 46756.7 Isoelectric Point: 6.5817 |
| Chromosome | Chromosome/Scaffold: 3 Start: 157017753 End: 157020044 |
| Description | Exostosin family protein |
| View CDS | |
| External Links |
|---|
| NCBI Taxonomy |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| GT47 | 50 | 345 | 0 |
| RLKVYVYDLPSKYNKKLLKKDPRCLSHMFAAEIFMHRFLLSSAVRTFNPEEADWFYTPVYTTCDLTPSGLPLPFKSPRMMRSAIELVATNWPYWNRSEGA DHFFVTPHDFGACFHYQEEKAIGRGILPLLQRATLVQTFGQKNHVCLKDGSITIPPFAPPQKMQAHLIPADTPRSIFVYFRGLFYDTSNDPEGGYYARGA RASVWENFKNNPLFDISTDHPATYYEDMQRSVFCLCPLGWAPWSPRLVEAVVFGCIPVIVADDIVLPFADAIPWEDIGVFVAEEDVPRLDTILTSI | |||
| Full Sequence |
|---|
| Protein Sequence Length: 419 Download |
| MRQWVLAVAI LAAASAAALL LGAEAQQQGH QTERISGSAG DVLEDNPVGR LKVYVYDLPS 60 KYNKKLLKKD PRCLSHMFAA EIFMHRFLLS SAVRTFNPEE ADWFYTPVYT TCDLTPSGLP 120 LPFKSPRMMR SAIELVATNW PYWNRSEGAD HFFVTPHDFG ACFHYQEEKA IGRGILPLLQ 180 RATLVQTFGQ KNHVCLKDGS ITIPPFAPPQ KMQAHLIPAD TPRSIFVYFR GLFYDTSNDP 240 EGGYYARGAR ASVWENFKNN PLFDISTDHP ATYYEDMQRS VFCLCPLGWA PWSPRLVEAV 300 VFGCIPVIVA DDIVLPFADA IPWEDIGVFV AEEDVPRLDT ILTSIPTDVV LRKQRLLANP 360 SMKQAMLFPQ PAQAGDAFHQ ILNGLARKLP HGDGVFLKPG DERVLNWTAG PPGDLKPW* 420 |
| Functional Domains Download unfiltered results here | ||||||
|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description |
| pfam03016 | Exostosin | 8.0e-86 | 50 | 345 | 304 | + Exostosin family. The EXT family is a family of tumour suppressor genes. Mutations of EXT1 on 8q24.1, EXT2 on 11p11-13, and EXT3 on 19p have been associated with the autosomal dominant disorder known as hereditary multiple exostoses (HME). This is the most common known skeletal dysplasia. The chromosomal locations of other EXT genes suggest association with other forms of neoplasia. EXT1 and EXT2 have both been shown to encode a heparan sulphate polymerase with both D-glucuronyl (GlcA) and N-acetyl-D-glucosaminoglycan (GlcNAC) transferase activities. The nature of the defect in heparan sulphate biosynthesis in HME is unclear. |
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0016020 | membrane |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | ACF82849.1 | 0 | 25 | 418 | 25 | 418 | unknown [Zea mays] |
| GenBank | ACF86410.1 | 0 | 25 | 418 | 25 | 418 | unknown [Zea mays] |
| RefSeq | NP_001130059.1 | 0 | 25 | 418 | 25 | 418 | hypothetical protein LOC100191151 [Zea mays] |
| RefSeq | NP_001149319.1 | 0 | 23 | 418 | 27 | 421 | secondary cell wall-related glycosyltransferase family 47 [Zea mays] |
| RefSeq | XP_002459017.1 | 0 | 29 | 418 | 32 | 420 | hypothetical protein SORBIDRAFT_03g044530 [Sorghum bicolor] |
