Basic Information | |
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Species | Vitis vinifera |
Cazyme ID | GSVIVT01015435001 |
Family | CBM43 |
Protein Properties | Length: 984 Molecular Weight: 110598 Isoelectric Point: 5.0553 |
Chromosome | Chromosome/Scaffold: 11 Start: 3655577 End: 3666473 |
Description | S-adenosyl-L-methionine-dependent methyltransferases superfamily protein |
View CDS |
External Links |
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NCBI Taxonomy |
Plaza |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
CBM43 | 864 | 944 | 5.6e-26 |
WCVLNPNTDDLEDLPDSINYACSMSDCTALGYGSSCNHLSVAGNASYAFNMYYQVNNQQSWDCDFSGLGIETEEDPSDDEC | |||
GH17 | 547 | 841 | 0 |
VGVNWGTMATHQLPPEKVVRMLKDNGFRKLKLFEADERILEALTGTHIEVMLAIPNYMLPEMSEDPSVATSWVQANVSSYSYAGGVNIKYVAVGNEPFLQ TYNGTFLKYTLPALKNIQQALNNEALESVKATVPFNADIYYSPDSNPVPSAGDFRAEVRDLTIEIIQYLHSNDAPFTVNIYPFLSLYGNAYFPMDYAFFD GSNKPIKDGNNVYTNVFDANFDTLVWALDRAGYPDVKIIVGEVGWPTDGDKNANGKIEAYLFSLIDENAKSIAPGCFERHWGIFEYDGKPKYELD |
Full Sequence |
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Protein Sequence Length: 984 Download |
MLLDESKFDL QLKLWALRIP SQLCKVASRI LNGYLLDKPR VKPITEDPTC ETNRYIILSE 60 RIKNPDLSDI PEDKRDELKV LCKIEVVPYS LTLGYSYWSA DHVLKQILPD GVEVPSSFET 120 ITFSLCHIAH LNITGELLPY KDVIAKVIYD KNYPRIKTVV NKVGTITNEF RVPKFEILVG 180 KDDMVTEVKQ YRATFKLDYS LVYWNSRLEH EHMRLVSQFR PGQIICDMFS GVGPFAIPAA 240 QKGCLVYAND LNPDSIRYLK INAKINKVDD NIWAYNMDAR KFISQLMEVP VHEILPEPDV 300 PVLKATEECS IQANVQTESQ NGGLTVEAIG VHSDDSSNMD GIEGSCTVAD DTVAAVKKHS 360 GSCEEENGTY DNATVSVVGR RKDRMNKRMR GSESSSNIKP WEHVDHVIMN LPASAIQFLD 420 AFRGLIQRKY WKGSLPWIHC YCFIRANETN EMIISEAETA LNASIQEPIL HRVRDVAPNK 480 AMFCLSFRLS EEACFKEDAT KKRTSFKETG QRFIKEKRMG EARLSCYHLL VLFLVMWMSM 540 RSSGFGVGVN WGTMATHQLP PEKVVRMLKD NGFRKLKLFE ADERILEALT GTHIEVMLAI 600 PNYMLPEMSE DPSVATSWVQ ANVSSYSYAG GVNIKYVAVG NEPFLQTYNG TFLKYTLPAL 660 KNIQQALNNE ALESVKATVP FNADIYYSPD SNPVPSAGDF RAEVRDLTIE IIQYLHSNDA 720 PFTVNIYPFL SLYGNAYFPM DYAFFDGSNK PIKDGNNVYT NVFDANFDTL VWALDRAGYP 780 DVKIIVGEVG WPTDGDKNAN GKIEAYLFSL IDENAKSIAP GCFERHWGIF EYDGKPKYEL 840 DVSGSRENKG LVAAEGVKYM VRRWCVLNPN TDDLEDLPDS INYACSMSDC TALGYGSSCN 900 HLSVAGNASY AFNMYYQVNN QQSWDCDFSG LGIETEEDPS DDECLFPVMI AHGSSLALHR 960 LDFLASIVII KLIALSVNSC AES* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
COG2520 | COG2520 | 4.0e-7 | 405 | 488 | 87 | + Predicted methyltransferase [General function prediction only] | ||
COG2520 | COG2520 | 3.0e-54 | 98 | 286 | 190 | + Predicted methyltransferase [General function prediction only] | ||
pfam02475 | Met_10 | 1.0e-56 | 116 | 284 | 171 | + Met-10+ like-protein. The methionine-10 mutant allele of N. crassa codes for a protein of unknown function. However, homologous proteins have been found in yeast suggesting this protein may be involved in methionine biosynthesis, transport and/or utilisation. | ||
pfam00332 | Glyco_hydro_17 | 1.0e-64 | 547 | 841 | 322 | + Glycosyl hydrolases family 17. |
Gene Ontology | |
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GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005975 | carbohydrate metabolic process |
GO:0016740 | transferase activity |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
EMBL | CAN80307.1 | 0 | 42 | 501 | 92 | 468 | hypothetical protein [Vitis vinifera] |
EMBL | CAN80308.1 | 0 | 519 | 968 | 1 | 427 | hypothetical protein [Vitis vinifera] |
EMBL | CBI28113.1 | 0 | 1 | 983 | 1 | 983 | unnamed protein product [Vitis vinifera] |
RefSeq | XP_002281488.1 | 0 | 1 | 501 | 1 | 497 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002281500.1 | 0 | 519 | 968 | 1 | 475 | PREDICTED: hypothetical protein [Vitis vinifera] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 3f55_D | 1.99993e-41 | 547 | 843 | 2 | 316 | A Chain A, Crystal Structure Of Nxg1-Deltayniig In Complex With Xllg, A Xyloglucan Derived Oligosaccharide |
PDB | 3f55_C | 1.99993e-41 | 547 | 843 | 2 | 316 | A Chain A, Crystal Structure Of Nxg1-Deltayniig In Complex With Xllg, A Xyloglucan Derived Oligosaccharide |
PDB | 3f55_B | 1.99993e-41 | 547 | 843 | 2 | 316 | A Chain A, Crystal Structure Of Nxg1-Deltayniig In Complex With Xllg, A Xyloglucan Derived Oligosaccharide |
PDB | 3f55_A | 1.99993e-41 | 547 | 843 | 2 | 316 | A Chain A, Crystal Structure Of Nxg1-Deltayniig In Complex With Xllg, A Xyloglucan Derived Oligosaccharide |
PDB | 3em5_D | 1.99993e-41 | 547 | 843 | 2 | 316 | A Chain A, Crystal Structure Of A Native Endo Beta-1,3-Glucanase (Hev B 2), A Major Allergen From Hevea Brasiliensis |
EST Download unfiltered results here | ||||
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Hit | Length | Start | End | EValue |
HO797198 | 441 | 546 | 959 | 0 |
CB892300 | 260 | 1 | 260 | 0 |
DW058763 | 260 | 2 | 261 | 0 |
EL382046 | 258 | 2 | 259 | 0 |
EL396080 | 260 | 2 | 261 | 0 |
Sequence Alignments (This image is cropped. Click for full image.) |
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