| Basic Information | |
|---|---|
| Species | Glycine max |
| Cazyme ID | Glyma02g09535.1 |
| Family | CE8 |
| Protein Properties | Length: 299 Molecular Weight: 33277.4 Isoelectric Point: 7.8191 |
| Chromosome | Chromosome/Scaffold: 02 Start: 7461354 End: 7464320 |
| Description | Pectin lyase-like superfamily protein |
| View CDS | |
| External Links |
|---|
| NCBI Taxonomy |
| Plaza |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
 | |||
| Family | Start | End | Evalue |
| CE8 | 71 | 162 | 9.7e-27 |
| IIVDLSGNGDFSTIQSAIDSISSDNKNWVYIYVKAGTYREKVKISFDKPFIVLEGEGQKNTFVEWDDHDSSAESPTFTTMADNVVVKSISFR | |||
| CE8 | 161 | 286 | 1.3e-38 |
| FRDCTISAIDANLGPGIIGFITAQGRTDPNDSNGFVFKQCNIIGNGTTYLGRPWRGYARVIFYNTKMSNIIQPLGWQPWGFAGQEDHITFAEYGNSGPGS DTSKRVSWLKNLDSSTVSKMASTSFI | |||
| Full Sequence |
|---|
| Protein Sequence Length: 299 Download |
| ELNFSALKKL VFSLAITMYL GWYLLTFFFF LTSVKIVLVH ANHNHHHHHH HEQRNNKQIA 60 NKTSHSSSGT IIVDLSGNGD FSTIQSAIDS ISSDNKNWVY IYVKAGTYRE KVKISFDKPF 120 IVLEGEGQKN TFVEWDDHDS SAESPTFTTM ADNVVVKSIS FRDCTISAID ANLGPGIIGF 180 ITAQGRTDPN DSNGFVFKQC NIIGNGTTYL GRPWRGYARV IFYNTKMSNI IQPLGWQPWG 240 FAGQEDHITF AEYGNSGPGS DTSKRVSWLK NLDSSTVSKM ASTSFIGTDG WLKTLTQL* 300 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
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| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| PLN02682 | PLN02682 | 6.0e-44 | 70 | 294 | 300 | + pectinesterase family protein | ||
| PLN02497 | PLN02497 | 9.0e-45 | 70 | 161 | 92 | + probable pectinesterase | ||
| PLN02176 | PLN02176 | 1.0e-46 | 70 | 295 | 302 | + putative pectinesterase | ||
| pfam01095 | Pectinesterase | 4.0e-48 | 71 | 289 | 299 | + Pectinesterase. | ||
| PLN02497 | PLN02497 | 5.0e-61 | 161 | 295 | 135 | + probable pectinesterase | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0005618 | cell wall |
| GO:0030599 | pectinesterase activity |
| GO:0042545 | cell wall modification |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| RefSeq | XP_002263748.1 | 4e-29 | 70 | 161 | 31 | 122 | PREDICTED: hypothetical protein [Vitis vinifera] |
| RefSeq | XP_002263748.1 | 0 | 161 | 292 | 193 | 324 | PREDICTED: hypothetical protein [Vitis vinifera] |
| RefSeq | XP_002323773.1 | 0 | 71 | 293 | 1 | 285 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002330032.1 | 0 | 70 | 295 | 38 | 322 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002518106.1 | 0 | 70 | 293 | 47 | 332 | Pectinesterase U1 precursor, putative [Ricinus communis] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 1gq8_A | 5e-22 | 158 | 296 | 164 | 312 | A Chain A, Pectin Methylesterase From Carrot |
| PDB | 1gq8_A | 0.000002 | 71 | 173 | 9 | 96 | A Chain A, Pectin Methylesterase From Carrot |
| PDB | 1xg2_A | 6e-18 | 158 | 268 | 160 | 277 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
| PDB | 1xg2_A | 0.00002 | 72 | 169 | 6 | 88 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
