| Basic Information | |
|---|---|
| Species | Glycine max |
| Cazyme ID | Glyma05g08020.2 |
| Family | GH17 |
| Protein Properties | Length: 823 Molecular Weight: 89166.7 Isoelectric Point: 9.9941 |
| Chromosome | Chromosome/Scaffold: 05 Start: 7939394 End: 7945170 |
| Description | Plant protein of unknown function (DUF936) |
| View CDS | |
| External Links |
|---|
| NCBI Taxonomy |
| Plaza |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
 | |||
| Family | Start | End | Evalue |
| GH17 | 29 | 121 | 1.7e-26 |
| VGVNWGTMATHKLPPNKVVKMLQENGFDKLKLFDAEEWIMAALMGTDIEVMLAIPNNMLEEMSRNPQVADSWVYENVTSYMYPGGLNIKAIAT | |||
| Full Sequence |
|---|
| Protein Sequence Length: 823 Download |
| MAQEKALRVR YLVAFLLVFF TMASCGSGVG VNWGTMATHK LPPNKVVKML QENGFDKLKL 60 FDAEEWIMAA LMGTDIEVML AIPNNMLEEM SRNPQVADSW VYENVTSYMY PGGLNIKAIA 120 TMASLTPGIL LKMLQAMNTN TRVTGDHRSP LLQVIGIVPA LAGSDLWSNQ GFYLNLSDSV 180 NSTYVLLSHP DTDLILSNRL QLGQFVHVDR FHFDSPLPSV SNLRPLAGRH PFLGTPEPLI 240 ARISPSTRHF LIQPLSDSEL DPLSLLSLNN NNKSPIPNPN PNPNHNHEEH KQHHKDSSKE 300 RISRDPLAPR DNNLPPQRFS SPATAKRSQS AGRNKIVSTT AERDPSPAGK GKRSASPVPS 360 KCVVPSLVSA REENRKVSRE PAIIVPSRYR QPSPTGRKQP SSSPRRTSLS PGRRLSGGLK 420 VSPLVADSSV KKKMATIVAG ISKVSDALVG SKSARKNWDE QLPATPVEAG GSKSKVDAQA 480 ILRTQAAMSR RLSDVSGQKP GSNDSSSNEK TKAVSPQSCV LEDKSNFAAM GITIHEKKWT 540 DGSVPLDAVS GNLARLGKEA MQRKILASTA AAEALEEANA TECIIRNLSM FSDLCSVCQA 600 RNPLPTIDRF FTIYDDVLKS TAMVESVASR HNSETPDEGI PTKHSKSLSF WVEAALATDL 660 QIVSLLTGTT VDPPSTLQKS LSKRQSLGAA KNLKVRSSPQ SSLSTGVWTG GSGMKETVEL 720 GANLLSEMQM WFLRFVEESL DAGFKVFGEC TADGKKALPL DGGSIAVVLS HLKRVNAWLD 780 RVVSKGDDSL TEKIEKLKRK IYGFVIQHVG TTFDSSASSA SS* |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
 | ||||||||
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| pfam04057 | Rep-A_N | 0.005 | 125 | 211 | 87 | + Replication factor-A protein 1, N-terminal domain. | ||
| cd04477 | RPA1N | 0.001 | 150 | 211 | 62 | + RPA1N: A subfamily of OB folds corresponding to the N-terminal OB-fold domain of human RPA1 (also called RPA70). RPA1 is the large subunit of Replication protein A (RPA). RPA is a nuclear ssDNA-binding protein (SSB) which appears to be involved in all aspects of DNA metabolism including replication, recombination, and repair. RPA also mediates specific interactions of various nuclear proteins. In animals, plants, and fungi, RPA is a heterotrimer with subunits of 70KDa (RPA1), 32kDa (RPA2), and 14 KDa (RPA3). RPA1N is known to specifically interact with the p53 tumor suppressor, DNA polymerase alpha, and transcription factors. In addition to RPA1N, RPA1 contains three other OB folds: ssDNA-binding domain (DBD)-A, DBD-B, and DBD-C. | ||
| pfam00332 | Glyco_hydro_17 | 3.0e-13 | 29 | 128 | 100 | + Glycosyl hydrolases family 17. | ||
| pfam06075 | DUF936 | 2.0e-109 | 125 | 814 | 697 | + Plant protein of unknown function (DUF936). This family consists of several hypothetical proteins from Arabidopsis thaliana and Oryza sativa. The function of this family is unknown. | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
| GO:0005975 | carbohydrate metabolic process |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| EMBL | CBI28115.1 | 0 | 122 | 815 | 1 | 650 | unnamed protein product [Vitis vinifera] |
| RefSeq | NP_193073.1 | 0 | 122 | 819 | 1 | 673 | unknown protein [Arabidopsis thaliana] |
| RefSeq | XP_002281524.1 | 0 | 122 | 815 | 1 | 698 | PREDICTED: hypothetical protein [Vitis vinifera] |
| RefSeq | XP_002324965.1 | 0 | 122 | 818 | 1 | 703 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002515571.1 | 0 | 122 | 822 | 1 | 684 | conserved hypothetical protein [Ricinus communis] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 2cyg_A | 0.000000001 | 29 | 128 | 1 | 98 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
| PDB | 3f55_D | 0.0000002 | 29 | 127 | 2 | 97 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
| PDB | 3f55_C | 0.0000002 | 29 | 127 | 2 | 97 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
| PDB | 3f55_B | 0.0000002 | 29 | 127 | 2 | 97 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
| PDB | 3f55_A | 0.0000002 | 29 | 127 | 2 | 97 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
| Transmembrane Domains | ||||
|---|---|---|---|---|
 | ||||
| Start | End | |||
| 12 | 34 | |||
| Signal Peptide | ||||
|---|---|---|---|---|
 | ||||
| Cleavage Site | ||||
| 28 | ||||
| Hydropathy |
|---|
 |
| EST Download unfiltered results here | ||||
|---|---|---|---|---|
 | ||||
| Hit | Length | Start | End | EValue |
| CO979790 | 232 | 583 | 814 | 0 |
| CA853076 | 183 | 583 | 765 | 0 |
| DY293491 | 353 | 121 | 459 | 0 |
| EY475260 | 260 | 115 | 374 | 0 |
| FC894951 | 293 | 121 | 399 | 0 |
| Sequence Alignments (This image is cropped. Click for full image.) |
|---|
 |
| Phylogeny |
|---|
 |