Basic Information | |
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Species | Glycine max |
Cazyme ID | Glyma14g10456.1 |
Family | CBM22 |
Protein Properties | Length: 931 Molecular Weight: 103874 Isoelectric Point: 6.9351 |
Chromosome | Chromosome/Scaffold: 14 Start: 8665596 End: 8671787 |
Description | glycosyl hydrolase family 10 protein / carbohydrate-binding domain-containing protein |
View CDS |
External Links |
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NCBI Taxonomy |
Plaza |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
CBM22 | 44 | 182 | 1.1e-28 |
NILLNHDFSSELNSWHLNNCTGYVISAESGNQGGISMESNVNYVVITDRKECWQGLEQDITNRISIGSTYTVSACVGVSGLSQRSSDVIATLKLEYHDSA TRYLFIGRTSVNKDSWEKLEGTFSLSTMPHRVIFYLEGP | |||
CBM22 | 216 | 352 | 4.9e-32 |
NIIINPQFDDGLNNWSGRGCKIMLHDSMNDGKIVPKSGKFFASATERTQSWNGIQQEITGRVQRKLAYEVTALVRIFGNNVSTADVRATLWVQTPDLREQ YIGIAKVQATDKDWVTMQGKFLLNGSPSKVVLYLEGP | |||
CBM22 | 387 | 528 | 2.8026e-45 |
NIIENSNLADSTNGWFPLGNCTLSVKTGSPHIIPPMARDSLGSHEFLSGRYILVTNRTQTWMGPAQTITDKVKLFVTYQVSAWVRIGSGSSGPQNVNVAL GVDNQWVNGGQTQVSDDMWHEIGGSFRIEKQPSKVMVYVQGP | |||
GH10 | 584 | 854 | 0 |
VIQTQNDFPIGTCISRMNIDNEDFVNFVVKHFNWAVFENELKWYWTEPQQGNFNYKDADNLLSLCQKHKIQTRGHCIFWEVDETVQQWIKSLNKNDLMTA VQNRLNGLLTRYKGKFSHYDVNNEMLHGSFYQDRLGKDIRANMFKTANQLDPSATLFVNDYHVEDGRDTRSSPDKYIHHILDLQEQGAPVGGIGIQGHID SPIGPIVSSSLDKLGILGLPIWFTELDVSSVNEYVRADDLEVMLREAMAHPTVEGIMLWGFWELFMSRDNS |
Full Sequence |
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Protein Sequence Length: 931 Download |
MKRFSACCFT SRISKFHSHW KRNHSRSQIM AGIISGPSGS EGVNILLNHD FSSELNSWHL 60 NNCTGYVISA ESGNQGGISM ESNVNYVVIT DRKECWQGLE QDITNRISIG STYTVSACVG 120 VSGLSQRSSD VIATLKLEYH DSATRYLFIG RTSVNKDSWE KLEGTFSLST MPHRVIFYLE 180 GPAPGVDLLI RSVEINCSTP NNSTTSTGCV SAGDDNIIIN PQFDDGLNNW SGRGCKIMLH 240 DSMNDGKIVP KSGKFFASAT ERTQSWNGIQ QEITGRVQRK LAYEVTALVR IFGNNVSTAD 300 VRATLWVQTP DLREQYIGIA KVQATDKDWV TMQGKFLLNG SPSKVVLYLE GPPPGTDILL 360 NNLILKHAAK TPPSTPPDLK NIAFGVNIIE NSNLADSTNG WFPLGNCTLS VKTGSPHIIP 420 PMARDSLGSH EFLSGRYILV TNRTQTWMGP AQTITDKVKL FVTYQVSAWV RIGSGSSGPQ 480 NVNVALGVDN QWVNGGQTQV SDDMWHEIGG SFRIEKQPSK VMVYVQGPAS GVDLMVAGLQ 540 IFPVDRHTRF RYLKIQTDKI RKRDVILKFS GLDSGSYANT SVKVIQTQND FPIGTCISRM 600 NIDNEDFVNF VVKHFNWAVF ENELKWYWTE PQQGNFNYKD ADNLLSLCQK HKIQTRGHCI 660 FWEVDETVQQ WIKSLNKNDL MTAVQNRLNG LLTRYKGKFS HYDVNNEMLH GSFYQDRLGK 720 DIRANMFKTA NQLDPSATLF VNDYHVEDGR DTRSSPDKYI HHILDLQEQG APVGGIGIQG 780 HIDSPIGPIV SSSLDKLGIL GLPIWFTELD VSSVNEYVRA DDLEVMLREA MAHPTVEGIM 840 LWGFWELFMS RDNSHLVNAE GDINEAGKRF LSLKQEWLSH SRGHVDEQGQ YNFRGFHGTY 900 DVQVVTPSKK ISKTFVLDKG DSPLVVSIDL * |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam02018 | CBM_4_9 | 8.0e-18 | 43 | 184 | 143 | + Carbohydrate binding domain. This family includes diverse carbohydrate binding domains. | ||
pfam02018 | CBM_4_9 | 3.0e-18 | 386 | 531 | 153 | + Carbohydrate binding domain. This family includes diverse carbohydrate binding domains. | ||
COG3693 | XynA | 3.0e-36 | 589 | 844 | 277 | + Beta-1,4-xylanase [Carbohydrate transport and metabolism] | ||
smart00633 | Glyco_10 | 4.0e-76 | 624 | 870 | 268 | + Glycosyl hydrolase family 10. | ||
pfam00331 | Glyco_hydro_10 | 2.0e-78 | 589 | 874 | 306 | + Glycosyl hydrolase family 10. |
Gene Ontology | |
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GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005975 | carbohydrate metabolic process |
GO:0016798 | hydrolase activity, acting on glycosyl bonds |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | AAX33301.1 | 0 | 38 | 930 | 24 | 915 | putative endo-1,4-beta-xylanase [Populus tremula x Populus tremuloides] |
RefSeq | XP_002283550.1 | 0 | 12 | 930 | 64 | 981 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002301133.1 | 0 | 38 | 930 | 158 | 1049 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002301133.1 | 0 | 44 | 536 | 2 | 479 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002301133.1 | 0 | 215 | 541 | 1 | 314 | predicted protein [Populus trichocarpa] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1xyz_B | 2e-31 | 593 | 844 | 39 | 307 | A Chain A, A Common Protein Fold And Similar Active Site In Two Distinct Families Of Beta-Glycanases |
PDB | 1xyz_A | 2e-31 | 593 | 844 | 39 | 307 | A Chain A, A Common Protein Fold And Similar Active Site In Two Distinct Families Of Beta-Glycanases |
PDB | 2g4f_B | 3e-29 | 578 | 866 | 1 | 292 | A Chain A, A Common Protein Fold And Similar Active Site In Two Distinct Families Of Beta-Glycanases |
PDB | 2g4f_A | 3e-29 | 578 | 866 | 1 | 292 | A Chain A, A Common Protein Fold And Similar Active Site In Two Distinct Families Of Beta-Glycanases |
PDB | 2g3j_A | 3e-29 | 578 | 866 | 1 | 292 | A Chain A, A Common Protein Fold And Similar Active Site In Two Distinct Families Of Beta-Glycanases |
Metabolic Pathways | |||
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Pathway Name | Reaction | EC | Protein Name |
(1,4)-β-xylan degradation | 3.2.1.8-RXN | EC-3.2.1.8 | endo-1,4-β-xylanase |
EST Download unfiltered results here | ||||
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Hit | Length | Start | End | EValue |
HO789518 | 281 | 630 | 910 | 0 |
EX570690 | 295 | 637 | 931 | 0 |
EX570691 | 281 | 637 | 917 | 0 |
EB442796 | 298 | 414 | 711 | 0 |
HO789518 | 23 | 909 | 931 | 0.79 |
Sequence Alignments (This image is cropped. Click for full image.) |
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