Basic Information | |
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Species | Glycine max |
Cazyme ID | Glyma14g10456.2 |
Family | CBM22 |
Protein Properties | Length: 902 Molecular Weight: 100325 Isoelectric Point: 6.377 |
Chromosome | Chromosome/Scaffold: 14 Start: 8665596 End: 8671787 |
Description | glycosyl hydrolase family 10 protein / carbohydrate-binding domain-containing protein |
View CDS |
External Links |
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NCBI Taxonomy |
Plaza |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
CBM22 | 15 | 153 | 1e-28 |
NILLNHDFSSELNSWHLNNCTGYVISAESGNQGGISMESNVNYVVITDRKECWQGLEQDITNRISIGSTYTVSACVGVSGLSQRSSDVIATLKLEYHDSA TRYLFIGRTSVNKDSWEKLEGTFSLSTMPHRVIFYLEGP | |||
CBM22 | 187 | 323 | 4.6e-32 |
NIIINPQFDDGLNNWSGRGCKIMLHDSMNDGKIVPKSGKFFASATERTQSWNGIQQEITGRVQRKLAYEVTALVRIFGNNVSTADVRATLWVQTPDLREQ YIGIAKVQATDKDWVTMQGKFLLNGSPSKVVLYLEGP | |||
CBM22 | 358 | 499 | 1.4013e-45 |
NIIENSNLADSTNGWFPLGNCTLSVKTGSPHIIPPMARDSLGSHEFLSGRYILVTNRTQTWMGPAQTITDKVKLFVTYQVSAWVRIGSGSSGPQNVNVAL GVDNQWVNGGQTQVSDDMWHEIGGSFRIEKQPSKVMVYVQGP | |||
GH10 | 555 | 825 | 0 |
VIQTQNDFPIGTCISRMNIDNEDFVNFVVKHFNWAVFENELKWYWTEPQQGNFNYKDADNLLSLCQKHKIQTRGHCIFWEVDETVQQWIKSLNKNDLMTA VQNRLNGLLTRYKGKFSHYDVNNEMLHGSFYQDRLGKDIRANMFKTANQLDPSATLFVNDYHVEDGRDTRSSPDKYIHHILDLQEQGAPVGGIGIQGHID SPIGPIVSSSLDKLGILGLPIWFTELDVSSVNEYVRADDLEVMLREAMAHPTVEGIMLWGFWELFMSRDNS |
Full Sequence |
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Protein Sequence Length: 902 Download |
MAGIISGPSG SEGVNILLNH DFSSELNSWH LNNCTGYVIS AESGNQGGIS MESNVNYVVI 60 TDRKECWQGL EQDITNRISI GSTYTVSACV GVSGLSQRSS DVIATLKLEY HDSATRYLFI 120 GRTSVNKDSW EKLEGTFSLS TMPHRVIFYL EGPAPGVDLL IRSVEINCST PNNSTTSTGC 180 VSAGDDNIII NPQFDDGLNN WSGRGCKIML HDSMNDGKIV PKSGKFFASA TERTQSWNGI 240 QQEITGRVQR KLAYEVTALV RIFGNNVSTA DVRATLWVQT PDLREQYIGI AKVQATDKDW 300 VTMQGKFLLN GSPSKVVLYL EGPPPGTDIL LNNLILKHAA KTPPSTPPDL KNIAFGVNII 360 ENSNLADSTN GWFPLGNCTL SVKTGSPHII PPMARDSLGS HEFLSGRYIL VTNRTQTWMG 420 PAQTITDKVK LFVTYQVSAW VRIGSGSSGP QNVNVALGVD NQWVNGGQTQ VSDDMWHEIG 480 GSFRIEKQPS KVMVYVQGPA SGVDLMVAGL QIFPVDRHTR FRYLKIQTDK IRKRDVILKF 540 SGLDSGSYAN TSVKVIQTQN DFPIGTCISR MNIDNEDFVN FVVKHFNWAV FENELKWYWT 600 EPQQGNFNYK DADNLLSLCQ KHKIQTRGHC IFWEVDETVQ QWIKSLNKND LMTAVQNRLN 660 GLLTRYKGKF SHYDVNNEML HGSFYQDRLG KDIRANMFKT ANQLDPSATL FVNDYHVEDG 720 RDTRSSPDKY IHHILDLQEQ GAPVGGIGIQ GHIDSPIGPI VSSSLDKLGI LGLPIWFTEL 780 DVSSVNEYVR ADDLEVMLRE AMAHPTVEGI MLWGFWELFM SRDNSHLVNA EGDINEAGKR 840 FLSLKQEWLS HSRGHVDEQG QYNFRGFHGT YDVQVVTPSK KISKTFVLDK GDSPLVVSID 900 L* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam02018 | CBM_4_9 | 1.0e-17 | 14 | 155 | 143 | + Carbohydrate binding domain. This family includes diverse carbohydrate binding domains. | ||
pfam02018 | CBM_4_9 | 4.0e-18 | 357 | 502 | 153 | + Carbohydrate binding domain. This family includes diverse carbohydrate binding domains. | ||
COG3693 | XynA | 4.0e-36 | 560 | 815 | 277 | + Beta-1,4-xylanase [Carbohydrate transport and metabolism] | ||
smart00633 | Glyco_10 | 4.0e-76 | 595 | 841 | 268 | + Glycosyl hydrolase family 10. | ||
pfam00331 | Glyco_hydro_10 | 2.0e-78 | 560 | 845 | 306 | + Glycosyl hydrolase family 10. |
Gene Ontology | |
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GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005975 | carbohydrate metabolic process |
GO:0016798 | hydrolase activity, acting on glycosyl bonds |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | AAX33301.1 | 0 | 9 | 901 | 24 | 915 | putative endo-1,4-beta-xylanase [Populus tremula x Populus tremuloides] |
RefSeq | XP_002283550.1 | 0 | 15 | 901 | 94 | 981 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002301133.1 | 0 | 9 | 901 | 158 | 1049 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002301133.1 | 0 | 15 | 507 | 2 | 479 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002301133.1 | 0 | 186 | 512 | 1 | 314 | predicted protein [Populus trichocarpa] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1xyz_B | 2e-31 | 564 | 815 | 39 | 307 | A Chain A, A Common Protein Fold And Similar Active Site In Two Distinct Families Of Beta-Glycanases |
PDB | 1xyz_A | 2e-31 | 564 | 815 | 39 | 307 | A Chain A, A Common Protein Fold And Similar Active Site In Two Distinct Families Of Beta-Glycanases |
PDB | 2g4f_B | 3e-29 | 549 | 837 | 1 | 292 | A Chain A, A Common Protein Fold And Similar Active Site In Two Distinct Families Of Beta-Glycanases |
PDB | 2g4f_A | 3e-29 | 549 | 837 | 1 | 292 | A Chain A, A Common Protein Fold And Similar Active Site In Two Distinct Families Of Beta-Glycanases |
PDB | 2g3j_A | 3e-29 | 549 | 837 | 1 | 292 | A Chain A, A Common Protein Fold And Similar Active Site In Two Distinct Families Of Beta-Glycanases |
Metabolic Pathways | |||
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Pathway Name | Reaction | EC | Protein Name |
(1,4)-β-xylan degradation | 3.2.1.8-RXN | EC-3.2.1.8 | endo-1,4-β-xylanase |
EST Download unfiltered results here | ||||
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Hit | Length | Start | End | EValue |
HO789518 | 281 | 601 | 881 | 0 |
EX570690 | 295 | 608 | 902 | 0 |
EX570691 | 281 | 608 | 888 | 0 |
EB442796 | 298 | 385 | 682 | 0 |
HO789518 | 23 | 880 | 902 | 0.76 |
Sequence Alignments (This image is cropped. Click for full image.) |
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