| Basic Information | |
|---|---|
| Species | Glycine max |
| Cazyme ID | Glyma15g00400.2 |
| Family | CE8 |
| Protein Properties | Length: 322 Molecular Weight: 35577.4 Isoelectric Point: 7.5228 |
| Chromosome | Chromosome/Scaffold: 15 Start: 195379 End: 199847 |
| Description | Plant invertase/pectin methylesterase inhibitor superfamily |
| View CDS | |
| External Links |
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| NCBI Taxonomy |
| Plaza |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
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| Family | Start | End | Evalue |
| CE8 | 22 | 289 | 0 |
| VIVSKDGSGNYTTVSEAIMKAPDMSDKPYTIHVRAGTYEEYVTIPAKKTNIKLVGDGPHLTKLVGYQNGSTIDVRGDGFMAEKMGFENWAGLKASAAVAV RNEAKKSVFFECSIQGVQDTLWAVSGSQFYKNCDIYGTVDFIYGNAAAVFQDCMLYARYSEYVTFTAQSREDPKEKTGFSFQRCKFTMSPQDSARKSKVL RATLGRPLRAYSTVAIFHSYIDSMVDPKGWEPMAHQPTDKVTYIEFHNFGPGSKTDHRVDWPGVKVLS | |||
| Full Sequence |
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| Protein Sequence Length: 322 Download |
| MDSTTAVLLI FVSVLVCCHS TVIVSKDGSG NYTTVSEAIM KAPDMSDKPY TIHVRAGTYE 60 EYVTIPAKKT NIKLVGDGPH LTKLVGYQNG STIDVRGDGF MAEKMGFENW AGLKASAAVA 120 VRNEAKKSVF FECSIQGVQD TLWAVSGSQF YKNCDIYGTV DFIYGNAAAV FQDCMLYARY 180 SEYVTFTAQS REDPKEKTGF SFQRCKFTMS PQDSARKSKV LRATLGRPLR AYSTVAIFHS 240 YIDSMVDPKG WEPMAHQPTD KVTYIEFHNF GPGSKTDHRV DWPGVKVLSR PTPSAHYFTA 300 SYLLDADSWI PSTGVPFDNL L* |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
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| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| PLN02416 | PLN02416 | 3.0e-84 | 22 | 319 | 311 | + probable pectinesterase/pectinesterase inhibitor | ||
| PLN02713 | PLN02713 | 3.0e-84 | 22 | 317 | 312 | + Probable pectinesterase/pectinesterase inhibitor | ||
| PLN02468 | PLN02468 | 8.0e-85 | 20 | 317 | 311 | + putative pectinesterase/pectinesterase inhibitor | ||
| PLN03043 | PLN03043 | 5.0e-85 | 13 | 317 | 321 | + Probable pectinesterase/pectinesterase inhibitor; Provisional | ||
| pfam01095 | Pectinesterase | 5.0e-110 | 22 | 307 | 299 | + Pectinesterase. | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0005618 | cell wall |
| GO:0030599 | pectinesterase activity |
| GO:0042545 | cell wall modification |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | ABN08348.1 | 0 | 22 | 319 | 225 | 532 | Pectinesterase; Pectinesterase inhibitor [Medicago truncatula] |
| EMBL | CAN76835.1 | 0 | 10 | 321 | 175 | 497 | hypothetical protein [Vitis vinifera] |
| EMBL | CBI24285.1 | 0 | 10 | 321 | 122 | 444 | unnamed protein product [Vitis vinifera] |
| RefSeq | XP_002310960.1 | 0 | 16 | 317 | 219 | 538 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002516192.1 | 0 | 22 | 319 | 234 | 541 | Pectinesterase PPE8B precursor, putative [Ricinus communis] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 1xg2_A | 0 | 20 | 317 | 3 | 311 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
| PDB | 1gq8_A | 0 | 22 | 317 | 9 | 315 | A Chain A, Pectin Methylesterase From Carrot |
| PDB | 1qjv_B | 0.00000000000002 | 22 | 180 | 6 | 194 | A Chain A, Pectin Methylesterase Pema From Erwinia Chrysanthemi |
| PDB | 1qjv_A | 0.00000000000002 | 22 | 180 | 6 | 194 | A Chain A, Pectin Methylesterase Pema From Erwinia Chrysanthemi |
| PDB | 2ntq_B | 0.00000000000002 | 22 | 180 | 6 | 194 | A Chain A, Pectin Methylesterase Pema From Erwinia Chrysanthemi |
| Metabolic Pathways | |||
|---|---|---|---|
| Pathway Name | Reaction | EC | Protein Name |
| homogalacturonan degradation | RXN-2102 | EC-3.1.1.11 | pectinesterase |
| Transmembrane Domains | |||||
|---|---|---|---|---|---|
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| Start | End | ||||
| 7 | 24 | ||||
| Signal Peptide | |||||
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| Cleavage Site | |||||
| 20 | |||||
| Hydropathy |
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| EST Download unfiltered results here | ||||
|---|---|---|---|---|
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| Hit | Length | Start | End | EValue |
| FF397353 | 224 | 5 | 224 | 0 |
| HO778758 | 309 | 22 | 317 | 0 |
| DR054787 | 268 | 22 | 276 | 0 |
| CO475715 | 291 | 20 | 297 | 0 |
| HO777316 | 315 | 19 | 317 | 0 |
| Orthologous Group | |||||
|---|---|---|---|---|---|
| Species | ID | ||||
| Phaseolus vulgaris | Phvul.005G184400.1 | ||||
| Sequence Alignments (This image is cropped. Click for full image.) |
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| Phylogeny |
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