| Basic Information | |
|---|---|
| Species | Gossypium raimondii |
| Cazyme ID | Gorai.006G260700.1 |
| Family | CE8 |
| Protein Properties | Length: 565 Molecular Weight: 61832.8 Isoelectric Point: 7.1869 |
| Chromosome | Chromosome/Scaffold: 06 Start: 50135505 End: 50137593 |
| Description | Plant invertase/pectin methylesterase inhibitor superfamily |
| View CDS | |
| External Links |
|---|
| NCBI Taxonomy |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
 | |||
| Family | Start | End | Evalue |
| CE8 | 246 | 541 | 0 |
| NVVVAKDGSGKYDTITKALAEVPPKSPNRFIIHIKAGTYKEQVLLPKEMTNVMFIGDGPTKTIITNDLNCIRDHPLKTFGTATVGVDGAGFMARDIGFEN TAGPPGHQAVAFRATCDMVIMFNCHFNGYQDTLYAHKQKQFYRDCLISGTVDFIFGDAASVFQNCLIIARKPGENQNNMITAHGRKFPYTHSAIVLQNCT ISGAPDYLPVKDKSKTYLGRPWKALARTIIMQSNIDDIITPEGYSPMEGTVGLDTGYFVEFQNRGPGAKTEGRVKWPAIKTIDINEAKKWTPGVFL | |||
| Full Sequence |
|---|
| Protein Sequence Length: 565 Download |
| MANNVAVIGI FSVFLVAAVV AAVVGVTHLK NNGDSKSGEI SSSTKAVQTV CQPTQFKEAC 60 EKSLESSNST DPKELIRTSF QAAIEEIRKV LANSATIQDL NKDDNNKAAL KVCKEVLDLS 120 IADLQLSFDK LGGYEMSKIG DYLLNLRVWL SGALTTLQTC VDSYAEVNKE QAEKMNSILK 180 TSMELTQNSL TMVTKLSTIL NSLNIPGLNI DTTGFERKLL SNDGPEWMGH AERRLLQAKP 240 TDLKPNVVVA KDGSGKYDTI TKALAEVPPK SPNRFIIHIK AGTYKEQVLL PKEMTNVMFI 300 GDGPTKTIIT NDLNCIRDHP LKTFGTATVG VDGAGFMARD IGFENTAGPP GHQAVAFRAT 360 CDMVIMFNCH FNGYQDTLYA HKQKQFYRDC LISGTVDFIF GDAASVFQNC LIIARKPGEN 420 QNNMITAHGR KFPYTHSAIV LQNCTISGAP DYLPVKDKSK TYLGRPWKAL ARTIIMQSNI 480 DDIITPEGYS PMEGTVGLDT GYFVEFQNRG PGAKTEGRVK WPAIKTIDIN EAKKWTPGVF 540 LETETDKWIS QTGTPCYPDM VPGV* |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
 | ||||||||
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| PLN02468 | PLN02468 | 3.0e-155 | 4 | 560 | 567 | + putative pectinesterase/pectinesterase inhibitor | ||
| pfam01095 | Pectinesterase | 5.0e-167 | 246 | 541 | 297 | + Pectinesterase. | ||
| PLN02745 | PLN02745 | 2.0e-167 | 5 | 555 | 581 | + Putative pectinesterase/pectinesterase inhibitor | ||
| PLN02990 | PLN02990 | 3.0e-174 | 30 | 555 | 532 | + Probable pectinesterase/pectinesterase inhibitor | ||
| PLN02217 | PLN02217 | 0 | 7 | 563 | 559 | + probable pectinesterase/pectinesterase inhibitor | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0004857 | enzyme inhibitor activity |
| GO:0005618 | cell wall |
| GO:0030599 | pectinesterase activity |
| GO:0042545 | cell wall modification |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| EMBL | CBI22967.1 | 0 | 38 | 561 | 38 | 543 | unnamed protein product [Vitis vinifera] |
| EMBL | CBI39537.1 | 0 | 33 | 555 | 45 | 569 | unnamed protein product [Vitis vinifera] |
| RefSeq | XP_002279123.1 | 0 | 33 | 555 | 45 | 569 | PREDICTED: hypothetical protein [Vitis vinifera] |
| RefSeq | XP_002314364.1 | 0 | 35 | 561 | 48 | 569 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002516960.1 | 0 | 37 | 561 | 58 | 577 | Pectinesterase precursor, putative [Ricinus communis] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 1gq8_A | 0 | 243 | 555 | 5 | 314 | A Chain A, Pectin Methylesterase From Carrot |
| PDB | 1xg2_A | 0 | 246 | 553 | 4 | 308 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
| PDB | 1qjv_B | 7e-20 | 246 | 537 | 5 | 339 | A Chain A, Pectin Methylesterase Pema From Erwinia Chrysanthemi |
| PDB | 1qjv_A | 7e-20 | 246 | 537 | 5 | 339 | A Chain A, Pectin Methylesterase Pema From Erwinia Chrysanthemi |
| PDB | 2ntq_B | 8e-20 | 246 | 537 | 5 | 339 | A Chain A, Pectin Methylesterase Pema From Erwinia Chrysanthemi |
