| Basic Information | |
|---|---|
| Species | Gossypium raimondii |
| Cazyme ID | Gorai.009G261400.1 |
| Family | AA1 |
| Protein Properties | Length: 295 Molecular Weight: 32643.4 Isoelectric Point: 4.5382 |
| Chromosome | Chromosome/Scaffold: 09 Start: 21574505 End: 21576296 |
| Description | laccase 14 |
| View CDS | |
| External Links |
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| NCBI Taxonomy |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
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| Family | Start | End | Evalue |
| AA1 | 25 | 276 | 0 |
| ADVHYYEFSLQESPFTKLCSTKIILTLNGSFPGPEIRVRRGDTVFVNVHNQANYAVSLDWEGVTDTIDGSNNTIQPGRNFTYNIELGDEIGTLRWHATSA WAAATVHGAFVILPVATEDYPFPAPTSDQTIILGEWFREELTEANQTITPGSADAYTINGHPGETYGCSKDTTFEMQVDYEGLYLVRVINAVANETMVFD IENHRLTIVGQNGTYSNRSFTNSLTLAPGQVIDVLLFPNQNVGRYYITARSS | |||
| Full Sequence |
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| Protein Sequence Length: 295 Download |
| MGSEKQGFIW LSGLLFLNIF VLSTADVHYY EFSLQESPFT KLCSTKIILT LNGSFPGPEI 60 RVRRGDTVFV NVHNQANYAV SLDWEGVTDT IDGSNNTIQP GRNFTYNIEL GDEIGTLRWH 120 ATSAWAAATV HGAFVILPVA TEDYPFPAPT SDQTIILGEW FREELTEANQ TITPGSADAY 180 TINGHPGETY GCSKDTTFEM QVDYEGLYLV RVINAVANET MVFDIENHRL TIVGQNGTYS 240 NRSFTNSLTL APGQVIDVLL FPNQNVGRYY ITARSSSSTH ITNGMLRYTT TTTF* 300 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
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| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| pfam07732 | Cu-oxidase_3 | 5.0e-27 | 33 | 138 | 116 | + Multicopper oxidase. This entry contains many divergent copper oxidase-like domains that are not recognised by the pfam00394 model. | ||
| PLN02792 | PLN02792 | 4.0e-27 | 19 | 283 | 287 | + oxidoreductase | ||
| PLN02835 | PLN02835 | 2.0e-27 | 29 | 293 | 279 | + oxidoreductase | ||
| PLN02991 | PLN02991 | 2.0e-28 | 11 | 291 | 304 | + oxidoreductase | ||
| TIGR03389 | laccase | 7.0e-86 | 25 | 293 | 288 | + laccase, plant. Members of this protein family include the copper-containing enzyme laccase (EC 1.10.3.2), often several from a single plant species, and additional, uncharacterized, closely related plant proteins termed laccase-like multicopper oxidases. This protein family shows considerable sequence similarity to the L-ascorbate oxidase (EC 1.10.3.3) family. Laccases are enzymes of rather broad specificity, and classification of all proteins scoring about the trusted cutoff of this model as laccases may be appropriate. | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0005507 | copper ion binding |
| GO:0016491 | oxidoreductase activity |
| GO:0055114 | oxidation-reduction process |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | AAR83118.1 | 0 | 1 | 291 | 1 | 310 | secretory laccase [Gossypium arboreum] |
| EMBL | CBI18270.1 | 0 | 19 | 294 | 7 | 300 | unnamed protein product [Vitis vinifera] |
| RefSeq | XP_002263602.1 | 0 | 20 | 294 | 25 | 317 | PREDICTED: hypothetical protein [Vitis vinifera] |
| RefSeq | XP_002325575.1 | 0 | 20 | 277 | 8 | 278 | multicopper oxidase [Populus trichocarpa] |
| RefSeq | XP_002527127.1 | 0 | 7 | 273 | 14 | 289 | laccase, putative [Ricinus communis] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 1asq_B | 6e-17 | 25 | 280 | 1 | 286 | A Chain A, Arabidopsis Thaliana Peroxidase A2 |
| PDB | 1asq_A | 6e-17 | 25 | 280 | 1 | 286 | A Chain A, Arabidopsis Thaliana Peroxidase A2 |
| PDB | 1asp_B | 6e-17 | 25 | 280 | 1 | 286 | A Chain A, Arabidopsis Thaliana Peroxidase A2 |
| PDB | 1asp_A | 6e-17 | 25 | 280 | 1 | 286 | A Chain A, Arabidopsis Thaliana Peroxidase A2 |
| PDB | 1aso_B | 6e-17 | 25 | 280 | 1 | 286 | A Chain A, Arabidopsis Thaliana Peroxidase A2 |
| Transmembrane Domains | |||||
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| Start | End | ||||
| 7 | 29 | ||||
| Signal Peptide | |||||
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| Cleavage Site | |||||
| 25 | |||||
| Hydropathy |
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| EST Download unfiltered results here | ||||
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| Hit | Length | Start | End | EValue |
| CO108125 | 261 | 1 | 261 | 0 |
| GR925460 | 260 | 2 | 261 | 0 |
| ES810495 | 263 | 2 | 264 | 0 |
| CO108125 | 30 | 259 | 288 | 0.0000004 |
| ES810495 | 20 | 259 | 278 | 0.004 |
| Orthologous Group | |||||
|---|---|---|---|---|---|
| Species | ID | ||||
| Gossypium raimondii | Gorai.009G260700.1 | Gorai.009G261200.1 | Gorai.009G261600.1 | Gorai.009G287100.1 | Gorai.009G261200.2 |
| Sequence Alignments (This image is cropped. Click for full image.) |
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| Phylogeny |
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