| Basic Information | |
|---|---|
| Species | Gossypium raimondii |
| Cazyme ID | Gorai.009G272800.1 |
| Family | CE8 |
| Protein Properties | Length: 347 Molecular Weight: 39200.1 Isoelectric Point: 8.8403 |
| Chromosome | Chromosome/Scaffold: 09 Start: 22802357 End: 22805066 |
| Description | pectinesterase 11 |
| View CDS | |
| External Links |
|---|
| NCBI Taxonomy |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
 | |||
| Family | Start | End | Evalue |
| CE8 | 34 | 123 | 1.4e-24 |
| VDQLGKGDYEKIQDTIDVVPSDNREVVFILVEPGIYNEKIVVPADKPFITLSGSKPNGTIITGSDSENIFESATFTMLASDFIGQYLTIQ | |||
| CE8 | 123 | 221 | 1.7e-37 |
| QTYYNNCYIERAVDFIFGNASSLFERCHLHTLSEGGASIIAQRKESPSEKTRFIFQGCKITGVKTDVLGRPWGPYSRVIFALTYMSNVILPQGWDDWER | |||
| Full Sequence |
|---|
| Protein Sequence Length: 347 Download |
| MAAFIFFVTL FMLMASTPRA DAAQISAAAL LLRVDQLGKG DYEKIQDTID VVPSDNREVV 60 FILVEPGIYN EKIVVPADKP FITLSGSKPN GTIITGSDSE NIFESATFTM LASDFIGQYL 120 TIQTYYNNCY IERAVDFIFG NASSLFERCH LHTLSEGGAS IIAQRKESPS EKTRFIFQGC 180 KITGVKTDVL GRPWGPYSRV IFALTYMSNV ILPQGWDDWE RRLSWARLCL RFHGTRYFAS 240 PVLEDLTLLP FYYSFSLFIR DMIFLVVSMT ASLGRLIQVK VTYKEYKCYG PEANNRKRVE 300 WSQQLTAKEA EIFLTKNMID GKSWIKSTPK RFKKASSAIS NNSTTH* |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
 | ||||||||
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| PLN02432 | PLN02432 | 4.0e-15 | 278 | 326 | 49 | + putative pectinesterase | ||
| PLN02773 | PLN02773 | 3.0e-48 | 33 | 221 | 246 | + pectinesterase | ||
| PLN02480 | PLN02480 | 2.0e-50 | 34 | 325 | 343 | + Probable pectinesterase | ||
| PLN02682 | PLN02682 | 1.0e-61 | 38 | 326 | 344 | + pectinesterase family protein | ||
| PLN02432 | PLN02432 | 2.0e-102 | 33 | 219 | 226 | + putative pectinesterase | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0005618 | cell wall |
| GO:0030599 | pectinesterase activity |
| GO:0042545 | cell wall modification |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| EMBL | CAN79458.1 | 0 | 11 | 219 | 29 | 272 | hypothetical protein [Vitis vinifera] |
| EMBL | CBI19714.1 | 0 | 1 | 343 | 86 | 418 | unnamed protein product [Vitis vinifera] |
| RefSeq | XP_002281308.1 | 0 | 1 | 343 | 29 | 361 | PREDICTED: hypothetical protein [Vitis vinifera] |
| RefSeq | XP_002305435.1 | 0 | 11 | 333 | 5 | 315 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002512914.1 | 0 | 27 | 334 | 39 | 332 | Pectinesterase-3 precursor, putative [Ricinus communis] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 1gq8_A | 5e-25 | 38 | 328 | 15 | 311 | A Chain A, Pectin Methylesterase From Carrot |
| PDB | 1xg2_A | 8e-23 | 34 | 328 | 7 | 307 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
