Basic Information | |
---|---|
Species | Gossypium raimondii |
Cazyme ID | Gorai.010G190800.5 |
Family | GT8 |
Protein Properties | Length: 396 Molecular Weight: 46191.9 Isoelectric Point: 9.5047 |
Chromosome | Chromosome/Scaffold: 10 Start: 54467257 End: 54470517 |
Description | galacturonosyltransferase 4 |
View CDS |
External Links |
---|
NCBI Taxonomy |
CAZyDB |
Signature Domain Download full data set without filtering | |||
---|---|---|---|
Family | Start | End | Evalue |
GT8 | 57 | 367 | 0 |
CLPLRLTTEYYTLNSSQQNFPNQQKLEDPRLYHYALFSDNILAAAVVVNSTISHAKHPSDHVFHIVTDKLNYAAMRMWFLSNPPGKATIQVQNIEEFTWL NSSYSPVLKQLGSPSMIDYYFRAHRASSDSNLKFRNPKYLSILNHLRFYLPEIFPKLNKVLFLDDDIVVQKDLTGLWSLDLKGNVNGAVETCGESFHRFD RYLNFSNPLISKNFDPHACGWAYGMNIFDLAEWRRQSITEVYHRWQRLNRDRQLWKLGTLPPGLITFWKRTYSLDKSWHVLGLGYNPNVNQREIDRAAVI HYNGNLKPWLE |
Full Sequence |
---|
Protein Sequence Length: 396 Download |
MDQSLEKGKQ IQDDCAAVVK KLRAMLHSSE EQLRVHKKQT MFLTQLTAKT LPKGLHCLPL 60 RLTTEYYTLN SSQQNFPNQQ KLEDPRLYHY ALFSDNILAA AVVVNSTISH AKHPSDHVFH 120 IVTDKLNYAA MRMWFLSNPP GKATIQVQNI EEFTWLNSSY SPVLKQLGSP SMIDYYFRAH 180 RASSDSNLKF RNPKYLSILN HLRFYLPEIF PKLNKVLFLD DDIVVQKDLT GLWSLDLKGN 240 VNGAVETCGE SFHRFDRYLN FSNPLISKNF DPHACGWAYG MNIFDLAEWR RQSITEVYHR 300 WQRLNRDRQL WKLGTLPPGL ITFWKRTYSL DKSWHVLGLG YNPNVNQREI DRAAVIHYNG 360 NLKPWLEIGI PKYKIYWAKY VDYETVYLRE CNINP* |
Functional Domains Download unfiltered results here | ||||||||
---|---|---|---|---|---|---|---|---|
Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
PLN02829 | PLN02829 | 0 | 1 | 395 | 395 | + Probable galacturonosyltransferase | ||
PLN02910 | PLN02910 | 0 | 1 | 394 | 398 | + polygalacturonate 4-alpha-galacturonosyltransferase | ||
PLN02742 | PLN02742 | 0 | 7 | 393 | 390 | + Probable galacturonosyltransferase | ||
PLN02523 | PLN02523 | 0 | 19 | 395 | 382 | + galacturonosyltransferase | ||
PLN02718 | PLN02718 | 0 | 1 | 393 | 396 | + Probable galacturonosyltransferase |
Gene Ontology | |
---|---|
GO Term | Description |
GO:0016757 | transferase activity, transferring glycosyl groups |
Annotations - NR Download unfiltered results here | |||||||
---|---|---|---|---|---|---|---|
Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
DDBJ | BAB11325.1 | 0 | 1 | 395 | 221 | 615 | unnamed protein product [Arabidopsis thaliana] |
EMBL | CBI18781.1 | 0 | 1 | 395 | 244 | 638 | unnamed protein product [Vitis vinifera] |
RefSeq | NP_568688.1 | 0 | 1 | 395 | 222 | 616 | GAUT4 (Galacturonosyltransferase 4); polygalacturonate 4-alpha-galacturonosyltransferase/ transferase, transferring glycosyl groups [Arabidopsis thaliana] |
RefSeq | XP_002329942.1 | 0 | 1 | 395 | 266 | 665 | glycosyltransferase, CAZy family GT8 [Populus trichocarpa] |
RefSeq | XP_002525229.1 | 0 | 1 | 395 | 253 | 647 | Glycosyltransferase QUASIMODO1, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
---|---|---|---|---|---|---|---|
Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1ga8_A | 0.00002 | 192 | 365 | 75 | 252 | A Chain A, Crystal Structure Of A Methyltransferase-Like Protein (Spo2022) From Silicibacter Pomeroyi Dss-3 At 1.80 A Resolution |
PDB | 1g9r_A | 0.00002 | 192 | 365 | 75 | 252 | A Chain A, Crystal Structure Of Galactosyltransferase Lgtc In Complex With Mn And Udp-2f-Galactose |
PDB | 1ss9_A | 0.0001 | 192 | 307 | 75 | 182 | A Chain A, Crystal Structural Analysis Of Active Site Mutant Q189e Of Lgtc |
EST Download unfiltered results here | ||||
---|---|---|---|---|
Hit | Length | Start | End | EValue |
HO795725 | 396 | 1 | 396 | 0 |
DW237421 | 316 | 54 | 369 | 0 |
DW236602 | 290 | 55 | 344 | 0 |
DW238658 | 285 | 32 | 316 | 0 |
GO877254 | 323 | 19 | 341 | 0 |
Sequence Alignments (This image is cropped. Click for full image.) |
---|