| Basic Information | |
|---|---|
| Species | Linum usitatissimum |
| Cazyme ID | Lus10001466 |
| Family | CE8 |
| Protein Properties | Length: 465 Molecular Weight: 51847.8 Isoelectric Point: 10.3986 |
| Chromosome | Chromosome/Scaffold: 133 Start: 76565 End: 78688 |
| Description | Plant invertase/pectin methylesterase inhibitor superfamily |
| View CDS | |
| External Links |
|---|
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
 | |||
| Family | Start | End | Evalue |
| CE8 | 269 | 399 | 0 |
| LIVAKDGTGNFSTISEAVAAAPNSSHTRFVIYIKSGAYFENVEVEKKKLRLMFIGDGMGKTVVKANRSVVDGWTTFRSPTVAVVGNGFLAKGITIENSAG PSKHQAVALRSGADFSAFYQCSFVGYQDTLF | |||
| Full Sequence |
|---|
| Protein Sequence Length: 465 Download |
| MYNLTKLLAL LPISLFLLAT FLFLHRPIFT PSHINPNTKP TKLPQLHFYK HLDSINSACD 60 GTLYPDLCVS TLLSSFPGRL TFSSKSRSIP KLITATLNRT MSEVRASSSN CSRIQRTYIH 120 SHLDRVALAD CLELLDDSMS DILISMSDLK HMKSIPRHYN DMRTLLSAAI TNQFTCLDGF 180 AYSREKKLRD EIKMNLYNIS RHVSNSLVMM KKVPGVAEVE KSSGSDAARR LWSEDGFGGN 240 VGKDGFPTWL SRKDRRLLQA PVNETKFDLI VAKDGTGNFS TISEAVAAAP NSSHTRFVIY 300 IKSGAYFENV EVEKKKLRLM FIGDGMGKTV VKANRSVVDG WTTFRSPTVA VVGNGFLAKG 360 ITIENSAGPS KHQAVALRSG ADFSAFYQCS FVGYQDTLFR PLPPSVLPRL RRLRHRGLHI 420 RKRRGRPPKL QPLRPETKPE SEEHLHCPGA GGPEPKHRHC SPQL* |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
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| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| PLN02416 | PLN02416 | 6.0e-76 | 23 | 399 | 391 | + probable pectinesterase/pectinesterase inhibitor | ||
| pfam01095 | Pectinesterase | 5.0e-77 | 268 | 399 | 132 | + Pectinesterase. | ||
| PLN02484 | PLN02484 | 3.0e-77 | 50 | 399 | 358 | + probable pectinesterase/pectinesterase inhibitor | ||
| PLN02313 | PLN02313 | 3.0e-83 | 30 | 399 | 382 | + Pectinesterase/pectinesterase inhibitor | ||
| PLN02933 | PLN02933 | 4.0e-104 | 79 | 399 | 330 | + Probable pectinesterase/pectinesterase inhibitor | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0004857 | enzyme inhibitor activity |
| GO:0005618 | cell wall |
| GO:0030599 | pectinesterase activity |
| GO:0042545 | cell wall modification |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | ACQ85264.1 | 0 | 45 | 399 | 45 | 384 | pectin methylesterase [Musa acuminata AAA Group] |
| EMBL | CBI36883.1 | 0 | 13 | 399 | 22 | 381 | unnamed protein product [Vitis vinifera] |
| RefSeq | XP_002271665.1 | 0 | 1 | 399 | 1 | 383 | PREDICTED: hypothetical protein [Vitis vinifera] |
| RefSeq | XP_002301486.1 | 0 | 123 | 399 | 6 | 269 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002523113.1 | 0 | 42 | 399 | 36 | 376 | Pectinesterase-3 precursor, putative [Ricinus communis] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 1gq8_A | 5.60519e-45 | 268 | 399 | 8 | 139 | A Chain A, Pectin Methylesterase From Carrot |
| PDB | 1xg2_A | 1.99965e-42 | 268 | 399 | 4 | 135 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
| PDB | 3uw0_A | 0.00000002 | 262 | 399 | 26 | 183 | A Chain A, Pectin Methylesterase From Yersinia Enterocolitica |
| PDB | 2ntq_B | 0.0000004 | 265 | 399 | 2 | 157 | A Chain A, Pectin Methylesterase From Yersinia Enterocolitica |
| PDB | 2ntq_A | 0.0000004 | 265 | 399 | 2 | 157 | A Chain A, Pectin Methylesterase From Yersinia Enterocolitica |
