Basic Information | |
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Species | Linum usitatissimum |
Cazyme ID | Lus10018375 |
Family | AA2 |
Protein Properties | Length: 328 Molecular Weight: 35778 Isoelectric Point: 8.8081 |
Chromosome | Chromosome/Scaffold: 251 Start: 132758 End: 134318 |
Description | Peroxidase superfamily protein |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
AA2 | 45 | 310 | 1.4013e-45 |
HFNRDPSVPAGLLRLHFHDCFIRGCDGSVLIDSRGGNRAEKEAPPNLTLRGFEVIDDIKAKLERQCPGIVSCADTLALATRDGVALSGGSSYGLPTGRRD GTVSDVKEVHIPGPSVSISDALTALEPLNLGLDDLTTLLGAHSIGFCHCAFFIGRLYNFRGSGRPDPNMDPTLVSTLRTKCPRPGPNESFNVSTDPKVFM NPTSESPFRLDSSFYDNVMNQESVLHLDQQLAFTDITRKTASLYSSRPKVFRKRFAKAMVKLGNVG |
Full Sequence |
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Protein Sequence Length: 328 Download |
MAIALLFLIK FLVAFSTTEA SLELHFYRNS CPQAEAIVKS AMKRHFNRDP SVPAGLLRLH 60 FHDCFIRGCD GSVLIDSRGG NRAEKEAPPN LTLRGFEVID DIKAKLERQC PGIVSCADTL 120 ALATRDGVAL SGGSSYGLPT GRRDGTVSDV KEVHIPGPSV SISDALTALE PLNLGLDDLT 180 TLLGAHSIGF CHCAFFIGRL YNFRGSGRPD PNMDPTLVST LRTKCPRPGP NESFNVSTDP 240 KVFMNPTSES PFRLDSSFYD NVMNQESVLH LDQQLAFTDI TRKTASLYSS RPKVFRKRFA 300 KAMVKLGNVG VLTGSAGEIR RNCRRVN* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
cd00314 | plant_peroxidase_like | 4.0e-17 | 38 | 308 | 288 | + Heme-dependent peroxidases similar to plant peroxidases. Along with animal peroxidases, these enzymes belong to a group of peroxidases containing a heme prosthetic group (ferriprotoporphyrin IX), which catalyzes a multistep oxidative reaction involving hydrogen peroxide as the electron acceptor. The plant peroxidase-like superfamily is found in all three kingdoms of life and carries out a variety of biosynthetic and degradative functions. Several sub-families can be identified. Class I includes intracellular peroxidases present in fungi, plants, archaea and bacteria, called catalase-peroxidases, that can exhibit both catalase and broad-spectrum peroxidase activities depending on the steady-state concentration of hydrogen peroxide. Catalase-peroxidases are typically comprised of two homologous domains that probably arose via a single gene duplication event. Class II includes ligninase and other extracellular fungal peroxidases, while class III is comprised of classic extracellular plant peroxidases, like horseradish peroxidase. | ||
pfam00141 | peroxidase | 9.0e-52 | 38 | 188 | 153 | + Peroxidase. | ||
PLN03030 | PLN03030 | 2.0e-84 | 1 | 327 | 335 | + cationic peroxidase; Provisional | ||
cd00693 | secretory_peroxidase | 2.0e-149 | 22 | 326 | 306 | + Horseradish peroxidase and related secretory plant peroxidases. Secretory peroxidases belong to class III of the plant heme-dependent peroxidase superfamily. All members of the superfamily share a heme prosthetic group and catalyze a multistep oxidative reaction involving hydrogen peroxide as the electron acceptor. Class III peroxidases are found in the extracellular space or in the vacuole in plants where they have been implicated in hydrogen peroxide detoxification, auxin catabolism and lignin biosynthesis, and stress response. Class III peroxidases contain four conserved disulphide bridges and two conserved calcium binding sites. |
Gene Ontology | |
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GO Term | Description |
GO:0004601 | peroxidase activity |
GO:0006979 | response to oxidative stress |
GO:0020037 | heme binding |
GO:0055114 | oxidation-reduction process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | AAM65434.1 | 0 | 2 | 327 | 8 | 312 | peroxidase ATP13a [Arabidopsis thaliana] |
GenBank | ABN08471.1 | 0 | 22 | 327 | 22 | 311 | Haem peroxidase, plant/fungal/bacterial [Medicago truncatula] |
RefSeq | NP_197284.1 | 0 | 2 | 327 | 9 | 313 | peroxidase 57 (PER57) (P57) (PRXR10) [Arabidopsis thaliana] |
RefSeq | XP_001769260.1 | 0 | 21 | 327 | 9 | 307 | predicted protein [Physcomitrella patens subsp. patens] |
RefSeq | XP_002466916.1 | 0 | 25 | 327 | 32 | 337 | hypothetical protein SORBIDRAFT_01g016620 [Sorghum bicolor] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1qo4_A | 0 | 22 | 327 | 3 | 304 | A Chain A, Crystal Structure Of A Rice Os3bglu6 Beta-glucosidase |
PDB | 1pa2_A | 0 | 22 | 327 | 3 | 304 | A Chain A, Arabidopsis Thaliana Peroxidase A2 |
PDB | 1sch_B | 0 | 22 | 327 | 2 | 294 | A Chain A, Peanut Peroxidase |
PDB | 1sch_A | 0 | 22 | 327 | 2 | 294 | A Chain A, Peanut Peroxidase |
PDB | 3hdl_A | 0 | 22 | 327 | 2 | 303 | A Chain A, Crystal Structure Of Highly Glycosylated Peroxidase From Royal Palm Tree |