PlantCAZyme

Basic Information
Species	Linum usitatissimum
Cazyme ID	Lus10020313
Family	CE8
Protein Properties	Length: 380 Molecular Weight: 40186 Isoelectric Point: 8.6253
Chromosome	Chromosome/Scaffold: 641 Start: 347348 End: 348487
Description	Plant invertase/pectin methylesterase inhibitor superfamily
View CDS

External Links
CAZyDB

Signature Domain Download full data set without filtering

Family	Start	End	Evalue
CE8	71	362	0
AVVAADGSGGFRTISEALSAYKLNEFGRFVVYVKTGEYDETITVRKNQVNVTIYGDGANQTVVYGSKSTELGIATYETATLAVLGDGFVCRSMSIENRAK RSAGNSSAAAITAVAVRVQADKSAFYNCTIEGGKSALYSLAHRQFYSECKISGSGDLIMGDAAAVIQDSEILISGGGAVTAQGRAERYETTGFVLQNCTV KGISGGKIVLGRPWGKRSRAVVMESYLGENVAAEGWKVTAGGGEVAPAEEKYYYAEFGNYGPGSGTDKRVRGANVLNKDGSDAVRFGPSLFI

Full Sequence
Protein Sequence Length: 380 Download
MDRLSAAVAY QISCRDGLRR IGDVRTRLGK PIKMTSNSLA IVTSTFNSRN ENFPPIQNSN 60 TGGSEPPRPD AVVAADGSGG FRTISEALSA YKLNEFGRFV VYVKTGEYDE TITVRKNQVN 120 VTIYGDGANQ TVVYGSKSTE LGIATYETAT LAVLGDGFVC RSMSIENRAK RSAGNSSAAA 180 ITAVAVRVQA DKSAFYNCTI EGGKSALYSL AHRQFYSECK ISGSGDLIMG DAAAVIQDSE 240 ILISGGGAVT AQGRAERYET TGFVLQNCTV KGISGGKIVL GRPWGKRSRA VVMESYLGEN 300 VAAEGWKVTA GGGEVAPAEE KYYYAEFGNY GPGSGTDKRV RGANVLNKDG SDAVRFGPSL 360 FIQGDEWISQ AGVPFRGGL*

Full Sequence

Protein Sequence Length: 380 Download

MDRLSAAVAY QISCRDGLRR IGDVRTRLGK PIKMTSNSLA IVTSTFNSRN ENFPPIQNSN    60
TGGSEPPRPD AVVAADGSGG FRTISEALSA YKLNEFGRFV VYVKTGEYDE TITVRKNQVN    120
VTIYGDGANQ TVVYGSKSTE LGIATYETAT LAVLGDGFVC RSMSIENRAK RSAGNSSAAA    180
ITAVAVRVQA DKSAFYNCTI EGGKSALYSL AHRQFYSECK ISGSGDLIMG DAAAVIQDSE    240
ILISGGGAVT AQGRAERYET TGFVLQNCTV KGISGGKIVL GRPWGKRSRA VVMESYLGEN    300
VAAEGWKVTA GGGEVAPAEE KYYYAEFGNY GPGSGTDKRV RGANVLNKDG SDAVRFGPSL    360
FIQGDEWISQ AGVPFRGGL* 

Functional Domains Download unfiltered results here

Cdd ID	Domain	E-Value	Start	End	Length	Domain Description
PLN02217	PLN02217	3.0e-76	4	379	413	+ probable pectinesterase/pectinesterase inhibitor
PLN02314	PLN02314	2.0e-79	3	379	417	+ pectinesterase
PLN02468	PLN02468	8.0e-83	4	379	406	+ putative pectinesterase/pectinesterase inhibitor
pfam01095	Pectinesterase	5.0e-99	70	365	310	+ Pectinesterase.
PLN02745	PLN02745	4.0e-99	4	379	424	+ Putative pectinesterase/pectinesterase inhibitor

Gene Ontology
GO Term	Description
GO:0005618	cell wall
GO:0030599	pectinesterase activity
GO:0042545	cell wall modification

Annotations - NR Download unfiltered results here
Source	Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End	Description
EMBL	CBI26012.1	0	4	379	158	567	unnamed protein product [Vitis vinifera]
RefSeq	XP_002275000.1	0	4	379	158	567	PREDICTED: hypothetical protein [Vitis vinifera]
RefSeq	XP_002516193.1	0	4	379	185	592	Pectinesterase-1 precursor, putative [Ricinus communis]
RefSeq	XP_002519324.1	0	4	379	158	567	Pectinesterase-3 precursor, putative [Ricinus communis]
RefSeq	XP_002525673.1	0	4	379	177	570	Pectinesterase-3 precursor, putative [Ricinus communis]

Annotations - PDB Download unfiltered results here
Source	Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End	Description
PDB	1xg2_A	0	70	379	4	315	B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein
PDB	1gq8_A	0	69	379	7	319	A Chain A, Pectin Methylesterase From Carrot
PDB	1qjv_B	0.0000000000002	70	341	5	318	A Chain A, Pectin Methylesterase Pema From Erwinia Chrysanthemi
PDB	1qjv_A	0.0000000000002	70	341	5	318	A Chain A, Pectin Methylesterase Pema From Erwinia Chrysanthemi
PDB	2nt9_B	0.0000000000002	70	341	5	318	A Chain A, Pectin Methylesterase Pema From Erwinia Chrysanthemi

EST Download unfiltered results here

Hit	Length	Start	End	EValue
GR194961	290	97	368	0
CF208165	275	76	338	0
CO102256	267	56	306	0
GR461604	276	77	340	0
GR459079	248	68	303	0

Orthologous Group
Species	ID
Linum usitatissimum	Lus10005678
Ricinus communis	30072.m000929

CAZyme Information