| Basic Information | |
|---|---|
| Species | Linum usitatissimum |
| Cazyme ID | Lus10026860 |
| Family | GH1 |
| Protein Properties | Length: 347 Molecular Weight: 38205.9 Isoelectric Point: 6.5059 |
| Chromosome | Chromosome/Scaffold: 651 Start: 215428 End: 220798 |
| Description | beta glucosidase 42 |
| View CDS | |
| External Links |
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| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
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| Family | Start | End | Evalue |
| GH1 | 230 | 346 | 4.4e-34 |
| LMKSFATYPDTCFASFGDRVKNWITINEPLQTAINGHDCGIFAPGRHEQSATEPYLAAHHQILAHLAAVSVYRSKYKEKQKGQIGLVVDCEWAEPNSNTP EDKAAGARRLDFHLGWY | |||
| Full Sequence |
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| Protein Sequence Length: 347 Download |
| MSTTEEKGSS ATKTPADFLK SIRGRPVVVK LNSGVDYRGI LACLDGYMNI AMEQTEEYVN 60 GQLKNKYGDA FIRGNNGIIC YNETKIYNEA DARRWCLGAA NAGMNVRGIE DAEHFSKLST 120 AVSPASLGMM KDEFLHHHLP NTVIDDDKEQ TVCRTHFPPD FLFGVATSAY QIEGGANAGG 180 RGPSIWDAFT HSPGTVLDGS NGDVAVDHYH RYKYGNQMTF NKVVLLEVAL MKSFATYPDT 240 CFASFGDRVK NWITINEPLQ TAINGHDCGI FAPGRHEQSA TEPYLAAHHQ ILAHLAAVSV 300 YRSKYKEKQK GQIGLVVDCE WAEPNSNTPE DKAAGARRLD FHLGWY* |
| Functional Domains Download unfiltered results here | ||||||||
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| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| TIGR03356 | BGL | 4.0e-19 | 234 | 346 | 113 | + beta-galactosidase. | ||
| pfam00232 | Glyco_hydro_1 | 4.0e-28 | 157 | 213 | 57 | + Glycosyl hydrolase family 1. | ||
| COG2723 | BglB | 3.0e-29 | 157 | 346 | 257 | + Beta-glucosidase/6-phospho-beta-glucosidase/beta-galactosidase [Carbohydrate transport and metabolism] | ||
| TIGR03356 | BGL | 8.0e-32 | 158 | 234 | 77 | + beta-galactosidase. | ||
| cd01726 | LSm6 | 4.0e-38 | 14 | 76 | 63 | + Like-Sm protein 6. The eukaryotic LSm proteins (LSm2-8 or LSm1-7) assemble into a hetero-heptameric ring around the 3'-terminus uridylation tag of the gamma-methyl triphosphate (gamma-m-P3) capped U6 snRNA. LSm2-8 form the core of the snRNP particle that, in turn, assembles with other components onto the pre-mRNA to form the spliceosome which is responsible for the excision of introns and the ligation of exons. LSm1-7 is involved in recognition of the 3' uridylation tag and recruitment of the decapping machinery. LSm657 is believed to be an assembly intermediate for both the LSm1-7 and LSm2-8 rings. Members of this family share a highly conserved Sm fold containing an N-terminal helix followed by a strongly bent five-stranded antiparallel beta-sheet. | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
| GO:0005975 | carbohydrate metabolic process |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | ABW76289.1 | 0 | 226 | 346 | 157 | 277 | beta-glucosidase G4 [Medicago truncatula] |
| GenBank | ACN41025.1 | 0 | 138 | 346 | 12 | 288 | unknown [Picea sitchensis] |
| EMBL | CBI23349.1 | 0 | 226 | 346 | 1 | 121 | unnamed protein product [Vitis vinifera] |
| GenBank | EAZ28287.1 | 0 | 152 | 346 | 38 | 275 | hypothetical protein OsJ_12262 [Oryza sativa Japonica Group] |
| RefSeq | XP_002514775.1 | 0 | 148 | 346 | 16 | 276 | beta-glucosidase, putative [Ricinus communis] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 3scw_B | 0 | 152 | 346 | 15 | 276 | A Chain A, Crystal Structure Of Rice Bglu1 E386gY341A MUTANT COMPLEXED WITH Cellotetraose |
| PDB | 3scw_A | 0 | 152 | 346 | 15 | 276 | A Chain A, Crystal Structure Of Rice Bglu1 E386gY341A MUTANT COMPLEXED WITH Cellotetraose |
| PDB | 3scu_B | 0 | 152 | 346 | 15 | 276 | A Chain A, Crystal Structure Of Rice Bglu1 E386gY341A MUTANT COMPLEXED WITH Cellotetraose |
| PDB | 3scu_A | 0 | 152 | 346 | 15 | 276 | A Chain A, Crystal Structure Of Rice Bglu1 E386gY341A MUTANT COMPLEXED WITH Cellotetraose |
| PDB | 3sct_B | 0 | 152 | 346 | 15 | 276 | A Chain A, Crystal Structure Of Rice Bglu1 E386gY341A MUTANT COMPLEXED WITH Cellotetraose |
| Hydropathy |
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| EST Download unfiltered results here | ||||
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| Hit | Length | Start | End | EValue |
| GR709768 | 259 | 150 | 346 | 0 |
| DY922903 | 280 | 129 | 346 | 0 |
| JG237369 | 85 | 1 | 85 | 0 |
| JG237369 | 44 | 87 | 130 | 0 |
| JG197155 | 76 | 1 | 76 | 0 |
| Sequence Alignments (This image is cropped. Click for full image.) |
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| Phylogeny |
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