Basic Information | |
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Species | Linum usitatissimum |
Cazyme ID | Lus10031098 |
Family | CBM43 |
Protein Properties | Length: 490 Molecular Weight: 53400.2 Isoelectric Point: 4.4436 |
Chromosome | Chromosome/Scaffold: 261 Start: 1211762 End: 1213582 |
Description | O-Glycosyl hydrolases family 17 protein |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
CBM43 | 371 | 452 | 1.5e-23 |
WCMFDASAQDLSKLADNINYACTFSDCTALGYGSSCNGLDGNSNASYAFNMYYQVQNQDDMACNFEGLGTVTTQNISQGNCN | |||
GH17 | 27 | 348 | 0 |
LGVNWGTMATHQLPPKTVVEMLKANGLQKVKLFDADARTMNALAGSNIEVMVAIPNDQLQAMNDKDTAQDWVKRNVSRYTFNGGVNIKYVAVGNEPFLKS YNGSFINTTFPALQNIQNALNEANLGDSIKATVPMNADVYLSPDDQPYPSAGRFRPDINDLMTQIVQFLDKNKAPFTVNIYPFLSLYGNDDFPFNFAFFD GVTQPVVDKGTGLQYTNVFDANFDTLVSALKAAGYGDMTIMVGEVGWPTDGDKNGNAGNAYRFYNGLMPRLASNKGTPLRPGYIEIYLFGLLDEDAKSIA PGSFERHWGIFRYDGQPKFALD |
Full Sequence |
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Protein Sequence Length: 490 Download |
MEGCRFWFLL LAMLICGGGY YSVVDGLGVN WGTMATHQLP PKTVVEMLKA NGLQKVKLFD 60 ADARTMNALA GSNIEVMVAI PNDQLQAMND KDTAQDWVKR NVSRYTFNGG VNIKYVAVGN 120 EPFLKSYNGS FINTTFPALQ NIQNALNEAN LGDSIKATVP MNADVYLSPD DQPYPSAGRF 180 RPDINDLMTQ IVQFLDKNKA PFTVNIYPFL SLYGNDDFPF NFAFFDGVTQ PVVDKGTGLQ 240 YTNVFDANFD TLVSALKAAG YGDMTIMVGE VGWPTDGDKN GNAGNAYRFY NGLMPRLASN 300 KGTPLRPGYI EIYLFGLLDE DAKSIAPGSF ERHWGIFRYD GQPKFALDIS GQGQNKLLVG 360 AQDVNYLSNK WCMFDASAQD LSKLADNINY ACTFSDCTAL GYGSSCNGLD GNSNASYAFN 420 MYYQVQNQDD MACNFEGLGT VTTQNISQGN CNFMIQIATS SSSSIISHYS LVGAGLAFVA 480 LLASSFVLV* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
COG5309 | COG5309 | 6.0e-6 | 256 | 340 | 89 | + Exo-beta-1,3-glucanase [Carbohydrate transport and metabolism] | ||
pfam07983 | X8 | 8.0e-16 | 370 | 440 | 81 | + X8 domain. The X8 domain domain contains at least 6 conserved cysteine residues that presumably form three disulphide bridges. The domain is found in an Olive pollen allergen as well as at the C-terminus of several families of glycosyl hydrolases. This domain may be involved in carbohydrate binding. This domain is characteristic of GPI-anchored domains. | ||
smart00768 | X8 | 2.0e-29 | 370 | 453 | 86 | + Possibly involved in carbohydrate binding. The X8 domain, which may be involved in carbohydrate binding, is found in an Olive pollen antigen as well as at the C terminus of family 17 glycosyl hydrolases. It contains 6 conserved cysteine residues which presumably form three disulfide bridges. | ||
pfam00332 | Glyco_hydro_17 | 1.0e-69 | 27 | 348 | 325 | + Glycosyl hydrolases family 17. |
Gene Ontology | |
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GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005975 | carbohydrate metabolic process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | AAQ90287.1 | 0 | 24 | 481 | 25 | 480 | beta-1,3-glucanase, acidic [Coffea arabica] |
RefSeq | XP_002277003.1 | 0 | 5 | 457 | 4 | 453 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002319699.1 | 0 | 22 | 457 | 18 | 453 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002325410.1 | 0 | 22 | 488 | 18 | 508 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002525445.1 | 0 | 22 | 473 | 18 | 467 | Glucan endo-1,3-beta-glucosidase precursor, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 3f55_D | 0 | 27 | 350 | 2 | 316 | A Chain A, Barley 1,3-1,4-Beta-Glucanase In Monoclinic Space Group |
PDB | 3f55_C | 0 | 27 | 350 | 2 | 316 | A Chain A, Barley 1,3-1,4-Beta-Glucanase In Monoclinic Space Group |
PDB | 3f55_B | 0 | 27 | 350 | 2 | 316 | A Chain A, Barley 1,3-1,4-Beta-Glucanase In Monoclinic Space Group |
PDB | 3f55_A | 0 | 27 | 350 | 2 | 316 | A Chain A, Barley 1,3-1,4-Beta-Glucanase In Monoclinic Space Group |
PDB | 3em5_D | 0 | 27 | 350 | 2 | 316 | A Chain A, Crystal Structure Of A Native Endo Beta-1,3-Glucanase (Hev B 2), A Major Allergen From Hevea Brasiliensis |