| Basic Information | |
|---|---|
| Species | Linum usitatissimum |
| Cazyme ID | Lus10037528 |
| Family | CBM22 |
| Protein Properties | Length: 1446 Molecular Weight: 159087 Isoelectric Point: 7.179 |
| Chromosome | Chromosome/Scaffold: 196 Start: 386666 End: 393492 |
| Description | glycosyl hydrolase family 10 protein / carbohydrate-binding domain-containing protein |
| View CDS | |
| External Links |
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| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
 | |||
| Family | Start | End | Evalue |
| CBM22 | 120 | 257 | 8.4e-31 |
| NIIINHDFSEGLQSWHPNSCDGFVVSSNSDRLELLAGLVGGYAVVTNRKQCWQGIEQDITGRVSPGLTHTVSAVVGVSGHIQGPAEVIATLKLEQQGSGT QYLRVGKATVSKGQLEMLEGNFCLPTIPDRVVLYFEGP | |||
| CBM22 | 294 | 431 | 2.4e-31 |
| NIVLNNNFSQGLDSWHTNHCDGYVVKIDSSHPGRLANIAGSYAVVSNRKESWQGLEQDITSKVSPGLTYFVSAFVGVSGQIRGSAEEVNGTLKLEHQGSA TNYLPVGKTSVCYGKWKKLEGAFSLPTMPDRVVFYVEG | |||
| CBM22 | 469 | 605 | 1.1e-31 |
| NLILNHNFEDGLNNWSGRGCKILVHNSTADRKIVHESSKVIVVATGRTASWHGIQQEITGRVQRKLVYEVTAIVRIYGNNVTCADVQATLWVQNPDNREE YIGIAKLQAKDSDWVKLQGKFLLNGSPKKIVVYLEGP | |||
| CBM22 | 728 | 864 | 1.1e-31 |
| NLILNHNFEDGLNNWSGRGCKILVHNSTADRKIVHESSKVIVVATGRTASWHGIQQEITGRVQRKLVYEVTAIVRIYGNNVTCADVQATLWVQNPDNREE YIGIAKLQAKDSDWVKLQGKFLLNGSPKKIVVYLEGP | |||
| CBM22 | 898 | 1040 | 4.3e-37 |
| NILHNSNLSAGTNGWFPLGNCFLSVATGSPHVIAPMARESLGVHEPLSGRCIAVTNRTQTWMGPAQTITEKVKLFLTYQITAWVKICPGGANGPQNVNVA LGVDNEWVNGGQIEINDDQWHEIGSSFRIEKQASKIMVYIQGP | |||
| GH10 | 1095 | 1371 | 0 |
| KVRQTQNSFPLGTCISRSNIDNEDFVNFFVKNFNWAVFGNELKWSWTESQQGSLNYKDADDMLDLCKCHNIEIRGHCIFWDVDDTVQQWIKSLNKENFMK AVQNRLTNLLTRYKGRFKHYDVNNEMLHGSFFPDRLGEEIRPYMFKTANQLDPSATLFVNDYHVEDGRCARSTPAKYIEHILNLQEQGAPVGGIGIQGHI DSPVGPVVCSALDKLGILGLPIWFTELDVSSVNEHVRAEDLEVMLREAYAHPSVEGIVLWGFWELFMCRENSHLVDA | |||
| Full Sequence |
|---|
| Protein Sequence Length: 1446 Download |
| MFYGSTVWDP LLIVAQIVCL QCFYYVTLGL SLSVLVGTRV SRLSLVYFFD FVAVTSSSAT 60 GWCVIASFFL SSLAGAAYML YLIERAKKCL DFSTMDENMG NSNSSTHFSK DLVINNSMTN 120 IIINHDFSEG LQSWHPNSCD GFVVSSNSDR LELLAGLVGG YAVVTNRKQC WQGIEQDITG 180 RVSPGLTHTV SAVVGVSGHI QGPAEVIATL KLEQQGSGTQ YLRVGKATVS KGQLEMLEGN 240 FCLPTIPDRV VLYFEGPSAG ADILIASVNV CSSGPVNNDV ADEKNRDLGN RVSNIVLNNN 300 FSQGLDSWHT NHCDGYVVKI DSSHPGRLAN IAGSYAVVSN RKESWQGLEQ DITSKVSPGL 360 TYFVSAFVGV SGQIRGSAEE VNGTLKLEHQ GSATNYLPVG KTSVCYGKWK KLEGAFSLPT 420 MPDRVVFYVE GASPGANLLI KSVFIGDANS SKSIGARISH GSSENEDENL ILNHNFEDGL 480 NNWSGRGCKI LVHNSTADRK IVHESSKVIV VATGRTASWH GIQQEITGRV QRKLVYEVTA 540 IVRIYGNNVT CADVQATLWV QNPDNREEYI GIAKLQAKDS DWVKLQGKFL LNGSPKKIVV 600 YLEGPPPGTD VLVNSFTLKR AKKVLPSPLR IEHPAFGVNI LHNSNLSAGT NGWFPLGNCF 660 LSVATGSPHV IAPMARESLG VHEPLSGRCI AVTNRTQTWM GPAQTITEKV KLHGARISHG 720 SSENEDENLI LNHNFEDGLN NWSGRGCKIL VHNSTADRKI VHESSKVIVV ATGRTASWHG 780 IQQEITGRVQ RKLVYEVTAI VRIYGNNVTC ADVQATLWVQ NPDNREEYIG IAKLQAKDSD 840 WVKLQGKFLL NGSPKKIVVY LEGPPPGTDV LVNSFTLKRA KKVLPSPLRI EHPAFGVNIL 900 HNSNLSAGTN GWFPLGNCFL SVATGSPHVI APMARESLGV HEPLSGRCIA VTNRTQTWMG 960 PAQTITEKVK LFLTYQITAW VKICPGGANG PQNVNVALGV DNEWVNGGQI EINDDQWHEI 1020 GSSFRIEKQA SKIMVYIQGP AAGTDFMVAG LQIFAVDRAV RFNHLKRLTD KIRKRDVTLK 1080 LTGANSSCLR GTLVKVRQTQ NSFPLGTCIS RSNIDNEDFV NFFVKNFNWA VFGNELKWSW 1140 TESQQGSLNY KDADDMLDLC KCHNIEIRGH CIFWDVDDTV QQWIKSLNKE NFMKAVQNRL 1200 TNLLTRYKGR FKHYDVNNEM LHGSFFPDRL GEEIRPYMFK TANQLDPSAT LFVNDYHVED 1260 GRCARSTPAK YIEHILNLQE QGAPVGGIGI QGHIDSPVGP VVCSALDKLG ILGLPIWFTE 1320 LDVSSVNEHV RAEDLEVMLR EAYAHPSVEG IVLWGFWELF MCRENSHLVD AEGELNEAGR 1380 RFLALKKEWM SRADGCIGEH GEFGFRGFHG TYTVEIVGLE KVVTKTFVVE KGDTPLLLSI 1440 DLSNS* |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
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| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| pfam02018 | CBM_4_9 | 4.0e-17 | 469 | 609 | 143 | + Carbohydrate binding domain. This family includes diverse carbohydrate binding domains. | ||
| pfam02018 | CBM_4_9 | 2.0e-18 | 293 | 434 | 144 | + Carbohydrate binding domain. This family includes diverse carbohydrate binding domains. | ||
| COG3693 | XynA | 2.0e-31 | 1078 | 1356 | 300 | + Beta-1,4-xylanase [Carbohydrate transport and metabolism] | ||
| pfam00331 | Glyco_hydro_10 | 2.0e-74 | 1101 | 1386 | 306 | + Glycosyl hydrolase family 10. | ||
| smart00633 | Glyco_10 | 2.0e-75 | 1136 | 1382 | 268 | + Glycosyl hydrolase family 10. | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
| GO:0005975 | carbohydrate metabolic process |
| GO:0016798 | hydrolase activity, acting on glycosyl bonds |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| RefSeq | XP_002301133.1 | 0 | 115 | 613 | 159 | 655 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002301133.1 | 0 | 120 | 776 | 2 | 649 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002301133.1 | 0 | 468 | 710 | 1 | 226 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002301133.1 | 0 | 629 | 1442 | 254 | 1049 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002301133.1 | 0 | 727 | 1053 | 1 | 314 | predicted protein [Populus trichocarpa] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 1i1x_A | 1e-27 | 1126 | 1376 | 39 | 289 | A Chain A, Crystal Structure Of A Native Endo Beta-1,3-Glucanase (Hev B 2), A Major Allergen From Hevea Brasiliensis |
| PDB | 1i1w_A | 1e-27 | 1126 | 1376 | 39 | 289 | A Chain A, 0.89a Ultra High Resolution Structure Of A Thermostable Xylanase From Thermoascus Aurantiacus |
| PDB | 2bnj_A | 3e-27 | 1126 | 1376 | 39 | 289 | A Chain A, The Xylanase Ta From Thermoascus Aurantiacus Utilizes Arabinose Decorations Of Xylan As Significant Substrate Specificity Determinants |
| PDB | 1k6a_A | 7e-27 | 1134 | 1376 | 47 | 289 | A Chain A, Structural Studies On The Mobility In The Active Site Of The Thermoascus Aurantiacus Xylanase I |
| PDB | 1gor_A | 8e-27 | 1134 | 1376 | 47 | 289 | A Chain A, Structural Studies On The Mobility In The Active Site Of The Thermoascus Aurantiacus Xylanase I |
