CAZyme Information

Basic Information
SpeciesPicea abies
Cazyme IDMA_158718g0030
FamilyGT83
Protein PropertiesLength: 888 Molecular Weight: 96594.3 Isoelectric Point: 9.8445
View CDS
Signature Domain  Download full data set without filtering
FamilyStartEndEvalue
GT8373640
  VPLLIICLWAIAALPNLSVRSFIWEEGTNAEIARDILSNGNLLQPEVYGVRWNEKPSLLPWLIAGVAKITGEINEFSARLPAMIAVVLTGLLVQSLTRRY
  ASLNASLLAAVLFMFSPMLLQKLAIAEPDTLVTLFSFAAFIVWWNGVAAGRVGRGRWIGCGLLLAVLAMAKGPQPVGYFALGVSAYLVLTRRWRDVPGLL
  VCLLIPAAVTIAWASAVYRPGDEATWISYARLRSAPSFSDYIFRNTDVFLRLVVESMPAILLAPLLWRARVTEWNLPPVALPLALYAGLCTIAVVFWPGS
  NSRYAMPYVPAIAVLAGFAWDAIARTKYAWLRRITVAIACGLTAIQIVLANLVMPLFA
Full Sequence
Protein Sequence     Length: 888     Download
MTRRGAVPLL IICLWAIAAL PNLSVRSFIW EEGTNAEIAR DILSNGNLLQ PEVYGVRWNE    60
KPSLLPWLIA GVAKITGEIN EFSARLPAMI AVVLTGLLVQ SLTRRYASLN ASLLAAVLFM    120
FSPMLLQKLA IAEPDTLVTL FSFAAFIVWW NGVAAGRVGR GRWIGCGLLL AVLAMAKGPQ    180
PVGYFALGVS AYLVLTRRWR DVPGLLVCLL IPAAVTIAWA SAVYRPGDEA TWISYARLRS    240
APSFSDYIFR NTDVFLRLVV ESMPAILLAP LLWRARVTEW NLPPVALPLA LYAGLCTIAV    300
VFWPGSNSRY AMPYVPAIAV LAGFAWDAIA RTKYAWLRRI TVAIACGLTA IQIVLANLVM    360
PLFADRFGGS RIAGQSIERA IRANPAPAFC TDLATNQLFY MRAAPIRCVD PADLGSIVAP    420
AWLIVPREQV PLLVQLNPDR STRVAVETDS GSRLSAVRLD KRDRKRQHLK RARPLERRGA    480
GVFHTGGETM IKGLKLASAL LLALSASASA SEMPGVTATE IKVGGVFPFS GPASSIGLVG    540
RGVLAYVQSI NDRGGINGRK INYIAYDDAY SPPKAVEHVR KLVESDEVAF MFGQLGTPGN    600
TATAKYLTGK KVPALGIVSG SNKFTNVTDF PITTTSLVSF DTEGKIYAKY LNKTLPGKKY    660
AILYQNDDLG KDYVNAFKAL MKDEFDKRVV TAAYEIADPT VDSQIVNLKS SGAEALLVAG    720
TPKFAAQAIR KASEIGWKPT LLLNYPSSSV GATLKPAGLD KSIGVIAGTM TKDPTDSKWD    780
NDKGMKDYRA FVDKYMPGVD ISDTNYIFGY TQGMILEQII KQCGNDLSRE NILKQAKSLK    840
DIALPTALPG VLVNTSATVN QDFTQMRLQR WTGENWDQFS DVLDAKSE 
Functional Domains Download unfiltered results here
Cdd IDDomainE-ValueStartEndLengthDomain Description
cd06268PBP1_ABC_transporter_LIVBP_like2.0e-37522816296+
cd06326PBP1_STKc_like1.0e-38521839326+
COG0683LivK2.0e-41514846334+
pfam13458Peripla_BP_64.0e-45520873355+
cd06343PBP1_ABC_ligand_binding_like_86.0e-162515876363+
Annotations - NR Download unfiltered results here
SourceHit IDE-ValueQuery StartQuery EndHit StartHit EndDescription
RefSeqNP_949061.1049788514405high-affinity leucine-isoleucine-valine transport system; periplasmic binding protein [Rhodopseudomonas palustris CGA009]
RefSeqNP_949506.1050488617400branched chain amino-acid ABC transporter substrate-binding protein [Rhodopseudomonas palustris CGA009]
RefSeqYP_001208092.104968865400branched chain amino acid ABC transporter substrate-binding protein [Bradyrhizobium sp. ORS278]
RefSeqYP_001241056.104968887399putative branched-chain amino acid ABC transport system substrate-binding protein [Bradyrhizobium sp. BTAi1]
RefSeqYP_001993616.1050488617400putative ABC transporter (substrate-binding protein); putative branched-chain amino acid transporter [Rhodopseudomonas palustris TIE-1]
Annotations - PDB Download unfiltered results here
SourceHit IDE-ValueQuery StartQuery EndHit StartHit EndDescription
PDB3lop_A0.000000000025208415321A Chain A, Crystal Structure Of Substrate-Binding Periplasmic Protein (Pbp) From Ralstonia Solanacearum
PDB4evr_A0.000000251883314317A Chain A, Crystal Structure Of Substrate-Binding Periplasmic Protein (Pbp) From Ralstonia Solanacearum
PDB4evq_B0.000000251883314317A Chain A, Crystal Structure Of Abc Transporter From R. Palustris - Solute Binding Protein (Rpa0668) In Complex With 4-Hydroxybenzoate
PDB4evq_A0.000000251883314317A Chain A, Crystal Structure Of Abc Transporter From R. Palustris - Solute Binding Protein (Rpa0668) In Complex With 4-Hydroxybenzoate
PDB3ipa_A0.00000952874210223A Chain A, Crystal Structure Of Abc Transporter From R. Palustris - Solute Binding Protein (Rpa0668) In Complex With 4-Hydroxybenzoate
Transmembrane Domains
StartEnd
729
8299
106126
136153
202224
254273
280302
312329
342364
Signal Peptide
Cleavage Site
0
Hydropathy
EST Download unfiltered results here
HitLengthStartEndEValue
HO3740321575226780
CU5141351245346564e-32
CU514948995346327e-28
HO3966821295236519e-25
EY7008191825216990.00000003