Basic Information | |
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Species | Picea abies |
Cazyme ID | MA_158718g0030 |
Family | GT83 |
Protein Properties | Length: 888 Molecular Weight: 96594.3 Isoelectric Point: 9.8445 |
View CDS |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GT83 | 7 | 364 | 0 |
VPLLIICLWAIAALPNLSVRSFIWEEGTNAEIARDILSNGNLLQPEVYGVRWNEKPSLLPWLIAGVAKITGEINEFSARLPAMIAVVLTGLLVQSLTRRY ASLNASLLAAVLFMFSPMLLQKLAIAEPDTLVTLFSFAAFIVWWNGVAAGRVGRGRWIGCGLLLAVLAMAKGPQPVGYFALGVSAYLVLTRRWRDVPGLL VCLLIPAAVTIAWASAVYRPGDEATWISYARLRSAPSFSDYIFRNTDVFLRLVVESMPAILLAPLLWRARVTEWNLPPVALPLALYAGLCTIAVVFWPGS NSRYAMPYVPAIAVLAGFAWDAIARTKYAWLRRITVAIACGLTAIQIVLANLVMPLFA |
Full Sequence |
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Protein Sequence Length: 888 Download |
MTRRGAVPLL IICLWAIAAL PNLSVRSFIW EEGTNAEIAR DILSNGNLLQ PEVYGVRWNE 60 KPSLLPWLIA GVAKITGEIN EFSARLPAMI AVVLTGLLVQ SLTRRYASLN ASLLAAVLFM 120 FSPMLLQKLA IAEPDTLVTL FSFAAFIVWW NGVAAGRVGR GRWIGCGLLL AVLAMAKGPQ 180 PVGYFALGVS AYLVLTRRWR DVPGLLVCLL IPAAVTIAWA SAVYRPGDEA TWISYARLRS 240 APSFSDYIFR NTDVFLRLVV ESMPAILLAP LLWRARVTEW NLPPVALPLA LYAGLCTIAV 300 VFWPGSNSRY AMPYVPAIAV LAGFAWDAIA RTKYAWLRRI TVAIACGLTA IQIVLANLVM 360 PLFADRFGGS RIAGQSIERA IRANPAPAFC TDLATNQLFY MRAAPIRCVD PADLGSIVAP 420 AWLIVPREQV PLLVQLNPDR STRVAVETDS GSRLSAVRLD KRDRKRQHLK RARPLERRGA 480 GVFHTGGETM IKGLKLASAL LLALSASASA SEMPGVTATE IKVGGVFPFS GPASSIGLVG 540 RGVLAYVQSI NDRGGINGRK INYIAYDDAY SPPKAVEHVR KLVESDEVAF MFGQLGTPGN 600 TATAKYLTGK KVPALGIVSG SNKFTNVTDF PITTTSLVSF DTEGKIYAKY LNKTLPGKKY 660 AILYQNDDLG KDYVNAFKAL MKDEFDKRVV TAAYEIADPT VDSQIVNLKS SGAEALLVAG 720 TPKFAAQAIR KASEIGWKPT LLLNYPSSSV GATLKPAGLD KSIGVIAGTM TKDPTDSKWD 780 NDKGMKDYRA FVDKYMPGVD ISDTNYIFGY TQGMILEQII KQCGNDLSRE NILKQAKSLK 840 DIALPTALPG VLVNTSATVN QDFTQMRLQR WTGENWDQFS DVLDAKSE |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
cd06268 | PBP1_ABC_transporter_LIVBP_like | 2.0e-37 | 522 | 816 | 296 | + Periplasmic binding domain of ATP-binding cassette transporter-like systems that belong to the type I periplasmic binding fold protein superfamily. Periplasmic binding domain of ATP-binding cassette transporter-like systems that belong to the type I periplasmic binding fold protein superfamily. They are mostly present in archaea and eubacteria, and are primarily involved in scavenging solutes from the environment. ABC-type transporters couple ATP hydrolysis with the uptake and efflux of a wide range of substrates across bacterial membranes, including amino acids, peptides, lipids and sterols, and various drugs. These systems are comprised of transmembrane domains, nucleotide binding domains, and in most bacterial uptake systems, periplasmic binding proteins (PBPs) which transfer the ligand to the extracellular gate of the transmembrane domains. These PBPs bind their substrates selectively and with high affinity. Members of this group include ABC-type Leucine-Isoleucine-Valine-Binding Proteins (LIVBP), which are homologous to the aliphatic amidase transcriptional repressor, AmiC, of Pseudomonas aeruginosa. The uncharacterized periplasmic components of various ABC-type transport systems are included in this group. | ||
cd06326 | PBP1_STKc_like | 1.0e-38 | 521 | 839 | 326 | + Type I periplasmic binding domain of uncharacterized extracellular ligand-binding proteins. The type I periplasmic binding domain of uncharacterized extracellular ligand-binding proteins, some of which contain a conserved catalytic serine/threonine protein kinase (STKc) domain in the N-terminal region. Members of this group are sequence-similar to the branched-chain amino acid ABC transporter leucine-isoleucine-valine-binding protein (LIVBP); their ligand specificity has not been determined experimentally, however. | ||
COG0683 | LivK | 2.0e-41 | 514 | 846 | 334 | + ABC-type branched-chain amino acid transport systems, periplasmic component [Amino acid transport and metabolism] | ||
pfam13458 | Peripla_BP_6 | 4.0e-45 | 520 | 873 | 355 | + Periplasmic binding protein. This family includes a diverse range of periplasmic binding proteins. | ||
cd06343 | PBP1_ABC_ligand_binding_like_8 | 6.0e-162 | 515 | 876 | 363 | + Type I periplasmic ligand-binding domain of uncharacterized ABC (ATPase Binding Cassette)-type active transport systems that are predicted to be involved in uptake of amino acids, peptides, or inorganic ions. This subgroup includes the type I periplasmic ligand-binding domain of uncharacterized ABC (ATPase Binding Cassette)-type active transport systems that are predicted to be involved in uptake of amino acids, peptides, or inorganic ions. This subgroup has high sequence similarity to members of the family of hydrophobic amino acid transporters (HAAT), such as leucine/isoleucine/valine binding protein (LIVBP); however its ligand specificity has not been determined experimentally. |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
RefSeq | NP_949061.1 | 0 | 497 | 885 | 14 | 405 | high-affinity leucine-isoleucine-valine transport system; periplasmic binding protein [Rhodopseudomonas palustris CGA009] |
RefSeq | NP_949506.1 | 0 | 504 | 886 | 17 | 400 | branched chain amino-acid ABC transporter substrate-binding protein [Rhodopseudomonas palustris CGA009] |
RefSeq | YP_001208092.1 | 0 | 496 | 886 | 5 | 400 | branched chain amino acid ABC transporter substrate-binding protein [Bradyrhizobium sp. ORS278] |
RefSeq | YP_001241056.1 | 0 | 496 | 888 | 7 | 399 | putative branched-chain amino acid ABC transport system substrate-binding protein [Bradyrhizobium sp. BTAi1] |
RefSeq | YP_001993616.1 | 0 | 504 | 886 | 17 | 400 | putative ABC transporter (substrate-binding protein); putative branched-chain amino acid transporter [Rhodopseudomonas palustris TIE-1] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 3lop_A | 0.00000000002 | 520 | 841 | 5 | 321 | A Chain A, Crystal Structure Of Substrate-Binding Periplasmic Protein (Pbp) From Ralstonia Solanacearum |
PDB | 4evr_A | 0.0000002 | 518 | 833 | 14 | 317 | A Chain A, Crystal Structure Of Substrate-Binding Periplasmic Protein (Pbp) From Ralstonia Solanacearum |
PDB | 4evq_B | 0.0000002 | 518 | 833 | 14 | 317 | A Chain A, Crystal Structure Of Abc Transporter From R. Palustris - Solute Binding Protein (Rpa0668) In Complex With 4-Hydroxybenzoate |
PDB | 4evq_A | 0.0000002 | 518 | 833 | 14 | 317 | A Chain A, Crystal Structure Of Abc Transporter From R. Palustris - Solute Binding Protein (Rpa0668) In Complex With 4-Hydroxybenzoate |
PDB | 3ipa_A | 0.000009 | 528 | 742 | 10 | 223 | A Chain A, Crystal Structure Of Abc Transporter From R. Palustris - Solute Binding Protein (Rpa0668) In Complex With 4-Hydroxybenzoate |